RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 NTHL1P78549 312 aa15.53■□□□□ 0.08
SMURF1-203ENST00000472627 ELAVL2Q12926 359 aaKnown RBP15.53■□□□□ 0.08
SMURF1-203ENST00000472627 HSP90AA2PQ14568 343 aaPredicted RBP15.53■□□□□ 0.08
SMURF1-203ENST00000472627 PSMD5Q16401 504 aa15.53■□□□□ 0.08
SMURF1-203ENST00000472627 CSRP2Q16527 193 aa15.53■□□□□ 0.08
SMURF1-203ENST00000472627 LPAL2Q16609 132 aa15.53■□□□□ 0.08
SMURF1-203ENST00000472627 UVSSAQ2YD98 709 aa15.53■□□□□ 0.08
SMURF1-203ENST00000472627 MAMSTRQ6ZN01 415 aa15.53■□□□□ 0.08
SMURF1-203ENST00000472627 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.53■□□□□ 0.08
SMURF1-203ENST00000472627 TMEM143Q96AN5 459 aa15.53■□□□□ 0.08
SMURF1-203ENST00000472627 CSRNP2Q9H175 543 aa15.53■□□□□ 0.08
SMURF1-203ENST00000472627 SEMA4GQ9NTN9 838 aa15.53■□□□□ 0.08
SMURF1-203ENST00000472627 MRPS23Q9Y3D9 190 aaKnown RBP15.53■□□□□ 0.08
SMURF1-203ENST00000472627 F8W810 466 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 PRPF3O43395 683 aaKnown RBP15.52■□□□□ 0.08
SMURF1-203ENST00000472627 CNR2P34972 360 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 COL9A3Q14050 684 aaPredicted RBP15.52■□□□□ 0.08
SMURF1-203ENST00000472627 SIM2Q14190 667 aaPredicted RBP15.52■□□□□ 0.08
SMURF1-203ENST00000472627 KRT32Q14532 448 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 MXD4Q14582 209 aaPredicted RBP15.52■□□□□ 0.08
SMURF1-203ENST00000472627 PRSS55Q6UWB4 352 aaPredicted RBP15.52■□□□□ 0.08
SMURF1-203ENST00000472627 PRR23CQ6ZRP0 262 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 OTUD6AQ7L8S5 288 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 CEP57Q86XR8 500 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 NPAS3Q8IXF0 933 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 ITFG1Q8TB96 612 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 SLC7A14Q8TBB6 771 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 PIK3R5Q8WYR1 880 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 EIF2AQ9BY44 585 aaKnown RBP15.52■□□□□ 0.08
SMURF1-203ENST00000472627 SLKQ9H2G2 1235 aaPredicted RBP15.52■□□□□ 0.08
SMURF1-203ENST00000472627 CHRDQ9H2X0 955 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 MINDY3Q9H8M7 445 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 NDRG2Q9UN36 371 aaKnown RBP15.52■□□□□ 0.08
SMURF1-203ENST00000472627 CHD6Q8TD26 2715 aa15.52■□□□□ 0.08
SMURF1-203ENST00000472627 INO80B-WBP1J3KQ70 363 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 TSPAN1O60635 241 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 ADD1P35611 737 aaKnown RBP15.51■□□□□ 0.07
SMURF1-203ENST00000472627 NLRP5P59047 1200 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 RTP2Q5QGT7 225 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 AXDND1Q5T1B0 1012 aaPredicted RBP15.51■□□□□ 0.07
SMURF1-203ENST00000472627 FAM171A1Q5VUB5 890 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 FERMT3Q86UX7 667 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 TBCKQ8TEA7 893 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 TCEANC2Q96MN5 208 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 DHX33Q9H6R0 707 aaKnown RBP15.51■□□□□ 0.07
SMURF1-203ENST00000472627 BRD9Q9H8M2 597 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 HEBP1Q9NRV9 189 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 HES2Q9Y543 173 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 USP24Q9UPU5 2620 aa15.51■□□□□ 0.07
SMURF1-203ENST00000472627 CFAP47Q6ZTR5 3102 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 P4HBP07237 508 aaKnown RBP15.5■□□□□ 0.07
SMURF1-203ENST00000472627 NPEPPSP55786 919 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 EXOSC10Q01780 885 aaKnown RBP15.5■□□□□ 0.07
SMURF1-203ENST00000472627 EMC2Q15006 297 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 B3GNT9Q6UX72 402 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 IRF7Q92985 503 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 GJA10Q969M2 543 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 ELSPBP1Q96BH3 223 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 MTRQ99707 1265 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 CLSTN3Q9BQT9 956 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 ESYT1Q9BSJ8 1104 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 MIOSQ9NXC5 875 aa15.5■□□□□ 0.07
SMURF1-203ENST00000472627 TDRD15B5MCY1 1934 aaKnown RBP15.49■□□□□ 0.07
SMURF1-203ENST00000472627 CYP3A7-CYP3A51PA0A087WV96 503 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 CYP3A7P24462 503 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 CXCL12P48061 93 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 PTENP60484 403 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 TUSC3Q13454 348 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 SLC27A1Q6PCB7 646 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 C1orf228Q6PIY5 440 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 MOXD1Q6UVY6 613 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 ING5Q8WYH8 240 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 CPB2Q96IY4 423 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 RNF26Q9BY78 433 aaPredicted RBP15.49■□□□□ 0.07
SMURF1-203ENST00000472627 NXF3Q9H4D5 531 aaKnown RBP15.49■□□□□ 0.07
SMURF1-203ENST00000472627 SH3GLB2Q9NR46 395 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 BMP2KQ9NSY1 1161 aaPredicted RBP15.49■□□□□ 0.07
SMURF1-203ENST00000472627 PARP2Q9UGN5 583 aa15.49■□□□□ 0.07
SMURF1-203ENST00000472627 DDX25Q9UHL0 483 aaKnown RBP15.49■□□□□ 0.07
SMURF1-203ENST00000472627 ADAMTS3O15072 1205 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 AKAP5P24588 427 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 YWHABP31946 246 aaKnown RBP15.48■□□□□ 0.07
SMURF1-203ENST00000472627 SHC2P98077 582 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 POU5F1BQ06416 359 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 RAB33AQ14088 237 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 AASDHQ4L235 1098 aaPredicted RBP15.48■□□□□ 0.07
SMURF1-203ENST00000472627 C12orf50Q8NA57 414 aaPredicted RBP15.48■□□□□ 0.07
SMURF1-203ENST00000472627 LNX1Q8TBB1 728 aaPredicted RBP15.48■□□□□ 0.07
SMURF1-203ENST00000472627 ETNPPLQ8TBG4 499 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 FAM3CQ92520 227 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 MCRS1Q96EZ8 462 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 TRMT61BQ9BVS5 477 aaKnown RBP15.48■□□□□ 0.07
SMURF1-203ENST00000472627 ZFP14Q9HCL3 533 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 VPS54Q9P1Q0 977 aa15.48■□□□□ 0.07
SMURF1-203ENST00000472627 MARCH6O60337 910 aa15.47■□□□□ 0.07
SMURF1-203ENST00000472627 TDP2O95551 362 aa15.47■□□□□ 0.07
SMURF1-203ENST00000472627 LRG1P02750 347 aa15.47■□□□□ 0.07
SMURF1-203ENST00000472627 TDGF1P13385 188 aa15.47■□□□□ 0.07
SMURF1-203ENST00000472627 PPP2R5CQ13362 524 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms