RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 ACKR2O00590 384 aa20.76■□□□□ 0.91
COMMD1-207ENST00000471704 PRPF4BQ13523 1007 aaKnown RBP20.76■□□□□ 0.91
COMMD1-207ENST00000471704 EEF1DP3Q658K8 133 aa20.76■□□□□ 0.91
COMMD1-207ENST00000471704 ARL6IP4Q66PJ3 421 aaKnown RBP20.76■□□□□ 0.91
COMMD1-207ENST00000471704 RINT1Q6NUQ1 792 aa20.76■□□□□ 0.91
COMMD1-207ENST00000471704 DEPTORQ8TB45 409 aa20.76■□□□□ 0.91
COMMD1-207ENST00000471704 KIFAP3Q92845 792 aa20.76■□□□□ 0.91
COMMD1-207ENST00000471704 CHST7Q9NS84 486 aa20.76■□□□□ 0.91
COMMD1-207ENST00000471704 KLK14Q9P0G3 267 aa20.76■□□□□ 0.91
COMMD1-207ENST00000471704 SORCS3Q9UPU3 1222 aa20.76■□□□□ 0.91
COMMD1-207ENST00000471704 SSX2IPQ9Y2D8 614 aa20.76■□□□□ 0.91
COMMD1-207ENST00000471704 MTCL1Q9Y4B5 1905 aaKnown RBP20.76■□□□□ 0.91
COMMD1-207ENST00000471704 TEX28O15482 410 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 HIP1RO75146 1068 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 URODP06132 367 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 LIG1P18858 919 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 DSG1Q02413 1049 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 GRIN1Q05586 938 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 PPP2R5AQ15172 486 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 MAPK6Q16659 721 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 NT5DC1Q5TFE4 455 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 TAS1R3Q7RTX0 852 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 SUGP1Q8IWZ8 645 aaKnown RBP20.75■□□□□ 0.91
COMMD1-207ENST00000471704 UBALD2Q8IYN6 164 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 PRSS33Q8NF86 280 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 PLIN2Q99541 437 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 COLEC11Q9BWP8 271 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 CACNG4Q9UBN1 327 aa20.75■□□□□ 0.91
COMMD1-207ENST00000471704 PDCD11Q14690 1871 aaKnown RBP20.75■□□□□ 0.91
COMMD1-207ENST00000471704 C2CD2LO14523 706 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 N4BP3O15049 544 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 BRD1O95696 1058 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 NPTX2P47972 431 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 GLUD2P49448 558 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 PEX3P56589 373 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 ZRSR1Q15695 479 aaKnown RBP20.74■□□□□ 0.91
COMMD1-207ENST00000471704 TMEM119Q4V9L6 283 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 GPR65Q8IYL9 337 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 PLCD3Q8N3E9 789 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 CMASQ8NFW8 434 aaPredicted RBP20.74■□□□□ 0.91
COMMD1-207ENST00000471704 IFT74Q96LB3 600 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 SNTG2Q9NY99 539 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 PARP2Q9UGN5 583 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 LIMD1Q9UGP4 676 aa20.74■□□□□ 0.91
COMMD1-207ENST00000471704 VWA8A3KMH1 1905 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 VPS37CA5D8V6 355 aaPredicted RBP20.73■□□□□ 0.91
COMMD1-207ENST00000471704 PTGESO14684 152 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 NR1I2O75469 434 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 PAPLNO95428 1278 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 C1RP00736 705 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 ADH1AP07327 375 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 SLC12A3P55017 1021 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 GRIK3Q13003 919 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 MTMR3Q13615 1198 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 C15orf39Q6ZRI6 1047 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 BRAPQ7Z569 592 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 ZBTB33Q86T24 672 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 ALYREFQ86V81 257 aaKnown RBP20.73■□□□□ 0.91
COMMD1-207ENST00000471704 TDRD5Q8NAT2 981 aaKnown RBP20.73■□□□□ 0.91
COMMD1-207ENST00000471704 RHOBTB2Q9BYZ6 727 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 GPR62Q9BZJ7 368 aa20.73■□□□□ 0.91
COMMD1-207ENST00000471704 SFI1A8K8P3 1242 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 ASGR2P07307 311 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 GUCY2CP25092 1073 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 VCPP55072 806 aaKnown RBP20.72■□□□□ 0.91
COMMD1-207ENST00000471704 RESTQ13127 1097 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 SF3A1Q15459 793 aaKnown RBP20.72■□□□□ 0.91
COMMD1-207ENST00000471704 NAB2Q15742 525 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 SYT2Q8N9I0 419 aaPredicted RBP20.72■□□□□ 0.91
COMMD1-207ENST00000471704 RABGGTAQ92696 567 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 PRRX2Q99811 253 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 PAAF1Q9BRP4 392 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 MAN1C1Q9NR34 630 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 ARHGAP28Q9P2N2 729 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 PHLPP2Q6ZVD8 1323 aa20.72■□□□□ 0.91
COMMD1-207ENST00000471704 RECQL4O94761 1208 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 PDGFBP01127 241 aaPredicted RBP20.71■□□□□ 0.91
COMMD1-207ENST00000471704 SYT1P21579 422 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 AVPR2P30518 371 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 MRE11P49959 708 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 EFNA5P52803 228 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 RAD51AP2Q09MP3 1159 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 ATF7IP2Q5U623 682 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 FUT10Q6P4F1 479 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 B3GALT6Q96L58 329 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 NT5C3AQ9H0P0 336 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 SMOC2Q9H3U7 446 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 ADAM28Q9UKQ2 775 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 CITO14578 2027 aa20.71■□□□□ 0.91
COMMD1-207ENST00000471704 NPHP3-ACAD11A0A0J9YXS1 232 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 CCDC169A6NNP5 214 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 GLUD1P00367 558 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 PLA2G4BP0C869 781 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 TCF15Q12870 199 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 USP41Q3LFD5 358 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 ARSHQ5FYA8 562 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 FAM173BQ6P4H8 233 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 CYP26C1Q6V0L0 522 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 CCDC149Q6ZUS6 474 aa20.7■□□□□ 0.9
COMMD1-207ENST00000471704 OTOP3Q7RTS5 596 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms