RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 THRAP3Q9Y2W1 955 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 SH3TC1Q8TE82 1336 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 WDR33Q9C0J8 1336 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 COL4A2P08572 1712 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 TNRC18O15417 2968 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 XIRP2A4UGR9 3374 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 A0A087X0B3 334 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PRAMEF22A3QJZ6 481 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 ERVV-2B6SEH9 535 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 C9IYK1 514 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 SLC26A4O43511 780 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 SH3BP5O60239 455 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 N4BP1O75113 896 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 STAMBPO95630 424 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 TOP1P11387 765 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 FSTP19883 344 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PPP1R2P41236 205 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PDE6CP51160 858 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 RNASE9P60153 205 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 LACTBP83111 547 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CAP1Q01518 475 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 TRDNQ13061 729 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 NTRK3Q16288 839 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CCDC96Q2M329 555 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PROSER3Q2NL68 480 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 TSHZ3Q63HK5 1081 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 ZSCAN25Q6NSZ9 544 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PPP1R2P3Q6NXS1 205 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 RBM43Q6ZSC3 357 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PTF1AQ7RTS3 328 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 DAAM2Q86T65 1068 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 TBC1D1Q86TI0 1168 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CTAGE6Q86UF2 777 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 ZNF227Q86WZ6 799 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 C16orf71Q8IYS4 520 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 AGGF1Q8N302 714 aaeCLIP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CCDC63Q8NA47 563 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CCDC148Q8NFR7 591 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CXorf38Q8TB03 319 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 LINC01599Q8WXQ3 324 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 IFT81Q8WYA0 676 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 DACT3Q96B18 629 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 DYDC2Q96IM9 177 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 JADE2Q9NQC1 790 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 RGS17Q9UGC6 210 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 MOSPD1Q9UJG1 213 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 LUC7L2Q9Y383 392 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 ATRNL1Q5VV63 1379 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CTAGE15A4D2H0 777 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 AURKAO14965 403 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 DIAPH2O60879 1101 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 OPHN1O60890 802 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 NBPF7P0C2Y1 421 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 FAM153BP0C7A2 387 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CTAGE8P0CG41 777 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 SYT1P21579 422 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PRKCQQ04759 706 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 MPP3Q13368 585 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PDCLQ13371 301 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CDC37L1Q7L3B6 337 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 RAB11FIP4Q86YS3 637 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 CTAGE4Q8IX94 777 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 AOPEPQ8N6M6 819 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 EXOC4Q96A65 974 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 FAM210AQ96ND0 272 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 SPAG5Q96R06 1193 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 HAUS7Q99871 368 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 SELENOSQ9BQE4 189 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 DESI2Q9BSY9 194 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 G6PC3Q9BUM1 346 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 OSBPL1AQ9BXW6 950 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PARD6BQ9BYG5 372 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 MAF1Q9H063 256 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 NCOA5Q9HCD5 579 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 PAPOLBQ9NRJ5 636 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 ZNF446Q9NWS9 450 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 UTP6Q9NYH9 597 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 TMOD4Q9NZQ9 345 aa3.11□□□□□ -1.91
CCNL1-214ENST00000471247 FBXO2Q9UK22 296 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 RBMX2Q9Y388 322 aaKnown RBP3.11□□□□□ -1.91
CCNL1-214ENST00000471247 ZNF106Q9H2Y7 1883 aaKnown RBP3.1□□□□□ -1.91
CCNL1-214ENST00000471247 PPFIA4O75335 1185 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 PDHBP11177 359 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 CHRNA4P43681 627 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 IREB2P48200 963 aaKnown RBP3.1□□□□□ -1.91
CCNL1-214ENST00000471247 CTCFP49711 727 aaPredicted RBP3.1□□□□□ -1.91
CCNL1-214ENST00000471247 CHMP4BP1P59074 171 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 GABREP78334 506 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 TCEA2Q15560 299 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 IFI16Q16666 785 aaKnown RBP3.1□□□□□ -1.91
CCNL1-214ENST00000471247 MUM1Q2TAK8 710 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 Q4G0T1 1027 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 SLC44A4Q53GD3 710 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 SGO2Q562F6 1265 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 FAM133BQ5BKY9 247 aaKnown RBP3.1□□□□□ -1.91
CCNL1-214ENST00000471247 ZNF569Q5MCW4 686 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 C6orf183Q5T699 404 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 B4GALNT4Q76KP1 1039 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 PPP1R14BQ96C90 147 aa3.1□□□□□ -1.91
CCNL1-214ENST00000471247 EXOC2Q96KP1 924 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms