RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 COL4A3Q01955 1670 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 TRIM24O15164 1050 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 LPXNO60711 386 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 MAKP20794 623 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 FPR1P21462 350 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 AGXTP21549 392 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 GUCY1A2P33402 732 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 FLT3LGP49771 235 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 CDKN1CP49918 316 aaPredicted RBP6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 MALLQ13021 153 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 ANO4Q32M45 955 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 VRK3Q8IV63 474 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 CNTD1Q8N815 330 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 OR10H5Q8NGA6 315 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 STON2Q8WXE9 905 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 ACE2Q9BYF1 805 aaPredicted RBP6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 LDAHQ9H6V9 325 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 SPON1Q9HCB6 807 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 RBM12Q9NTZ6 932 aaKnown RBP6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 FZD1Q9UP38 647 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 PCDHGA2Q9Y5H1 932 aa6.87□□□□□ -1.31
PRPF40A-206ENST00000471167 CENPVL1A0A0U1RR11 272 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 CCDC78A2IDD5 438 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 B5MCH6 92 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 FZD9O00144 591 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 PCDHGA12O60330 932 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 CLSTN1O94985 981 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 RNASE9P60153 205 aaKnown RBP6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 NHLH2Q02577 135 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 FAPQ12884 760 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 KLF1Q13351 362 aaPredicted RBP6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 PDCD4Q53EL6 469 aaKnown RBP6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 MUM1L1Q5H9M0 696 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 HAS1Q92839 578 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 PAWRQ96IZ0 340 aaKnown RBP6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 SPC25Q9HBM1 224 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 SLC5A4Q9NY91 659 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 SLC23A1Q9UHI7 598 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 PCDHGA9Q9Y5G4 932 aaKnown RBP6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 PCDHGA8Q9Y5G5 932 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 PCDHGA7Q9Y5G6 932 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 PCDHGA6Q9Y5G7 932 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 PCDHGA3Q9Y5H0 932 aa6.86□□□□□ -1.31
PRPF40A-206ENST00000471167 TRIM75PA6NK02 468 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 PRR5-ARHGAP8B1AHC4 643 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 PHF2O75151 1096 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 ADH4P08319 380 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 HSP90B1P14625 803 aaKnown RBP6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 GSPT1P15170 499 aaKnown RBP6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 PCSK1P29120 753 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 PTPN7P35236 360 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 IARSP41252 1262 aaKnown RBP6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 LRRC55Q6ZSA7 311 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 AGAP2Q99490 1192 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 MYOCQ99972 504 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 CCDC8Q9H0W5 538 aaPredicted RBP6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 EIF2B4Q9UI10 523 aaKnown RBP6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 HDAC5Q9UQL6 1122 aa6.85□□□□□ -1.31
PRPF40A-206ENST00000471167 DRGXA6NNA5 263 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 NCR1O76036 304 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 AMY1AP04745 511 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 ITGB1P05556 798 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 MTHFD2P13995 350 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 CPEP16870 476 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 PROZP22891 400 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 MGAT2Q10469 447 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 MBNL2Q5VZF2 373 aaKnown RBP6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 GDF7Q7Z4P5 450 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 ZGPATQ8N5A5 531 aaKnown RBP6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 TFAP2CQ92754 450 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 DPF2Q92785 391 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 ADAM2Q99965 735 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 MENTQ9BUN1 341 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 SLC46A2Q9BY10 475 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 TRPM5Q9NZQ8 1165 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 TUBD1Q9UJT1 453 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 GPR45Q9Y5Y3 372 aa6.84□□□□□ -1.31
PRPF40A-206ENST00000471167 TMEM200CA6NKL6 621 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 MARCH11A6NNE9 402 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 PRSS23O95084 383 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 HMGB1P09429 215 aaKnown RBP6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 ECHS1P30084 290 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 EVA1CP58658 441 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 TGFB2P61812 414 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 MTMR1Q13613 665 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 NOMO1Q15155 1222 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 AFMIDQ63HM1 303 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 PQLC1Q8N2U9 271 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 MYEOVQ96EZ4 313 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 AKIP1Q9NQ31 210 aa6.83□□□□□ -1.32
PRPF40A-206ENST00000471167 GRID2IPA4D2P6 1211 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 FOXN1O15353 648 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 PJA2O43164 708 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 ELANEP08246 267 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 PTGS2P35354 604 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 ALDH1A3P47895 512 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 CHN2P52757 468 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 CLRN1P58418 232 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms