RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 SLC5A4Q9NY91 659 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 PLA2G3Q9NZ20 509 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 HECAQ9UBI9 543 aaPredicted RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 SERPINB13Q9UIV8 391 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 MSRAQ9UJ68 235 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 GIT1Q9Y2X7 761 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 MYO3AQ8NEV4 1616 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 SPATA31D1Q6ZQQ2 1576 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 FAM135BQ49AJ0 1406 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 PIK3R4Q99570 1358 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 TMEM2Q9UHN6 1383 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 A0A0A6YYJ9 748 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 C2orf78A6NCI8 922 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 TMEM191CA6NGB0 347 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 KRTAP29-1A8MX34 341 aaPredicted RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 TMEM127O75204 238 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 SEC24DO94855 1032 aaPredicted RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 CYP17A1P05093 508 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 PDGFRBP09619 1106 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 ADCY8P40145 1251 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 GUCY2FP51841 1108 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 PTTG1IPP53801 180 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 PPP3CAQ08209 521 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 FSTL1Q12841 308 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 IDI1Q13907 227 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 SAFB2Q14151 953 aaKnown RBP eCLIP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 EIF4HQ15056 248 aaKnown RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 DDB1Q16531 1140 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 RNF219Q5W0B1 726 aaPredicted RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 LAIR1Q6GTX8 287 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 SGMS1Q86VZ5 419 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 SPATS2Q86XZ4 545 aaKnown RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 C1orf162Q8NEQ5 155 aaPredicted RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 EAF2Q96CJ1 260 aaPredicted RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 SLC2A13Q96QE2 648 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 BTBD2Q9BX70 525 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 OR10A5Q9H207 317 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 SLKQ9H2G2 1235 aaPredicted RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 TMX1Q9H3N1 280 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 AGO3Q9H9G7 860 aaKnown RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 ZNF277Q9NRM2 450 aaPredicted RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 RRP7BPQ9NSQ0 103 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 PUF60Q9UHX1 559 aaKnown RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 CDC42EP3Q9UKI2 254 aa3.56□□□□□ -1.84
UBXN4-206ENST00000470687 APOBEC2Q9Y235 224 aaKnown RBP3.56□□□□□ -1.84
UBXN4-206ENST00000470687 RNF17Q9BXT8 1623 aaKnown RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 SLIT1O75093 1534 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 SCAF11Q99590 1463 aaKnown RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 KIF15Q9NS87 1388 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 GAS7O60861 476 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 OPHN1O60890 802 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 RAB11FIP3O75154 756 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 PROZP22891 400 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 CNGA1P29973 690 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 HSPA1LP34931 641 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 FLT3P36888 993 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 STAT5BP51692 787 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 SCAND1P57086 179 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 HHEXQ03014 270 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 HGFACQ04756 655 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 ABCB5Q2M3G0 1257 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 RNF187Q5TA31 235 aaPredicted RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 SPTY2D1Q68D10 685 aaPredicted RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 ADGRE4PQ86SQ3 457 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 GPR135Q8IZ08 494 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 MSL3Q8N5Y2 521 aaKnown RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 HOXB13Q92826 284 aaPredicted RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 USP7Q93009 1102 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 ZNF764Q96H86 408 aaPredicted RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 KIAA1683Q9H0B3 1180 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 NELFAQ9H3P2 528 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 CCM2LQ9NUG4 571 aaPredicted RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 GPRC5BQ9NZH0 403 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 ZKSCAN5Q9Y2L8 839 aa3.55□□□□□ -1.84
UBXN4-206ENST00000470687 POLR1AO95602 1720 aaPredicted RBP3.55□□□□□ -1.84
UBXN4-206ENST00000470687 LMTK2Q8IWU2 1503 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 ERVK-7P63135 1459 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 ARHGAP23Q9P227 1491 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 ROCK1Q13464 1354 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 MYPNQ86TC9 1320 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 UBA6A0AVT1 1052 aaPredicted RBP3.54□□□□□ -1.84
UBXN4-206ENST00000470687 TRIM75PA6NK02 468 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 CAPN14A8MX76 684 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 CYP27B1O15528 508 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 KDM1AO60341 852 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 BRINP1O60477 761 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 RBP3P10745 1247 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 HNRNPLP14866 589 aaKnown RBP eCLIP3.54□□□□□ -1.84
UBXN4-206ENST00000470687 SLC25A3Q00325 362 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 SRSF2Q01130 221 aaKnown RBP3.54□□□□□ -1.84
UBXN4-206ENST00000470687 RRP1BQ14684 758 aaKnown RBP3.54□□□□□ -1.84
UBXN4-206ENST00000470687 GRM7Q14831 915 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 SEPT2Q15019 361 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 KIAA1841Q6NSI8 718 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 DPP8Q6V1X1 898 aaPredicted RBP3.54□□□□□ -1.84
UBXN4-206ENST00000470687 NECAB2Q7Z6G3 386 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 PRIMA1Q86XR5 153 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 D2HGDHQ8N465 521 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 ZCRB1Q8TBF4 217 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms