RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 KRBA1A5PL33 1030 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 PRR5-ARHGAP8B1AHC4 643 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 C2CD2LO14523 706 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 NRP1O14786 923 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 SPTLC1O15269 473 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 INPPL1O15357 1258 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 ASAP2O43150 1006 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 GAS2O43903 313 aaKnown RBP9.89□□□□□ -0.83
XRN1-208ENST00000470537 ZNF862O60290 1169 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 MAFO75444 373 aaPredicted RBP9.89□□□□□ -0.83
XRN1-208ENST00000470537 CSDE1O75534 798 aaKnown RBP9.89□□□□□ -0.83
XRN1-208ENST00000470537 ADH1CP00326 375 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 SP9P0CG40 484 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 LAMP2P13473 410 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 GLUD2P49448 558 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 WDR4P57081 412 aaKnown RBP9.89□□□□□ -0.83
XRN1-208ENST00000470537 ARHGAP8P85298 464 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 PFKPQ01813 784 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 MTERF2Q49AM1 385 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 SPECC1Q5M775 1068 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 KIAA0319Q5VV43 1072 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 MIER3Q7Z3K6 550 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 SRGAP1Q7Z6B7 1085 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 MRPL10Q7Z7H8 261 aaKnown RBP9.89□□□□□ -0.83
XRN1-208ENST00000470537 ZNF280BQ86YH2 543 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 LPPQ93052 612 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 CCDC136Q96JN2 1154 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 NELL2Q99435 816 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 COLEC11Q9BWP8 271 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 LSG1Q9H089 658 aaKnown RBP9.89□□□□□ -0.83
XRN1-208ENST00000470537 AGPAT5Q9NUQ2 364 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 NCDNQ9UBB6 729 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 DNAJB4Q9UDY4 337 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 FBXO4Q9UKT5 387 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 CA14Q9ULX7 337 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 KLF18A0A0U1RQI7 1052 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 MSH4O15457 936 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 TEX28O15482 410 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 PRPF3O43395 683 aaKnown RBP9.88□□□□□ -0.83
XRN1-208ENST00000470537 LAMTOR5O43504 91 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 CHMP2AO43633 222 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 NARSO43776 548 aaKnown RBP9.88□□□□□ -0.83
XRN1-208ENST00000470537 DCNP07585 359 aaKnown RBP9.88□□□□□ -0.83
XRN1-208ENST00000470537 ITGA4P13612 1032 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 AXLP30530 894 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 CTHP32929 405 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 STARD6P59095 220 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 EXOSC10Q01780 885 aaKnown RBP9.88□□□□□ -0.83
XRN1-208ENST00000470537 PRKCQQ04759 706 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 LONRF3Q496Y0 759 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 RSPO2Q6UXX9 243 aaPredicted RBP9.88□□□□□ -0.83
XRN1-208ENST00000470537 MTSS1LQ765P7 747 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 PJA1Q8NG27 643 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 GPR152Q8TDT2 470 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 TCP11Q8WWU5 503 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 RIN2Q8WYP3 895 aaPredicted RBP9.88□□□□□ -0.83
XRN1-208ENST00000470537 SLC5A5Q92911 643 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 NLRP4Q96MN2 994 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 OSBPL6Q9BZF3 934 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 NT5C3AQ9H0P0 336 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 RXFP1Q9HBX9 757 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 PCDHGA2Q9Y5H1 932 aa9.88□□□□□ -0.83
XRN1-208ENST00000470537 DENND4AQ7Z401 1863 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 ANHXE9PGG2 379 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 DDHD2O94830 711 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 ERLIN2O94905 339 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 PAPLNO95428 1278 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 POMCP01189 267 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 TIMP2P16035 220 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 NCLP19338 710 aaKnown RBP9.87□□□□□ -0.83
XRN1-208ENST00000470537 LORP23490 312 aaPredicted RBP9.87□□□□□ -0.83
XRN1-208ENST00000470537 OR1G1P47890 313 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 PSMC5P62195 406 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 DSG1Q02413 1049 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 LMNB2Q03252 620 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 PPP2R5DQ14738 602 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 RSPO4Q2I0M5 234 aaPredicted RBP9.87□□□□□ -0.83
XRN1-208ENST00000470537 USP41Q3LFD5 358 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 TSGA10IPQ3SY00 556 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 AGMOQ6ZNB7 445 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 OTUD6AQ7L8S5 288 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 FAM174AQ8TBP5 190 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 BCL7CQ8WUZ0 217 aaPredicted RBP9.87□□□□□ -0.83
XRN1-208ENST00000470537 PSPC1Q8WXF1 523 aaKnown RBP9.87□□□□□ -0.83
XRN1-208ENST00000470537 RSAD2Q8WXG1 361 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 CCDC51Q96ER9 411 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 ESYT1Q9BSJ8 1104 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 HERC2P3Q9BVR0 1158 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 FAM126AQ9BYI3 521 aaPredicted RBP9.87□□□□□ -0.83
XRN1-208ENST00000470537 SH3GLB2Q9NR46 395 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 SPATA6Q9NWH7 488 aaPredicted RBP9.87□□□□□ -0.83
XRN1-208ENST00000470537 FNIP2Q9P278 1114 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 CDV3Q9UKY7 258 aaKnown RBP9.87□□□□□ -0.83
XRN1-208ENST00000470537 BRPF3Q9ULD4 1205 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 MRPS17Q9Y2R5 130 aaKnown RBP9.87□□□□□ -0.83
XRN1-208ENST00000470537 COL4A3BPQ9Y5P4 624 aa9.87□□□□□ -0.83
XRN1-208ENST00000470537 KANSL1LA0AUZ9 987 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 N4BP1O75113 896 aaKnown RBP9.86□□□□□ -0.83
XRN1-208ENST00000470537 PSMD10O75832 226 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 SRGAP2CP0DJJ0 459 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms