RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 POU5F1Q01860 360 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 CYP24A1Q07973 514 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 ENOX2Q16206 610 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 SNRNP35Q16560 246 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 TPD52L1Q16890 204 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 SLC10A6Q3KNW5 377 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 TCP11X2Q5H9J9 407 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 FAM43BQ6ZT52 329 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 FRMD5Q7Z6J6 570 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 ZNF598Q86UK7 904 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 FAM186BQ8IYM0 893 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 CRIPAKQ8N1N5 446 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 APBB2Q92870 758 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 BADQ92934 168 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 CNOT6LQ96LI5 555 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 ADPGKQ9BRR6 497 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 FTHL17Q9BXU8 183 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 CXCL16Q9H2A7 254 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 NXF3Q9H4D5 531 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 KIAA1586Q9HCI6 787 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 SNTG2Q9NY99 539 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 IPPQ9Y573 584 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 TTC26A0AVF1 554 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 ZNF233A6NK53 670 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 KCNJ18B7U540 433 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 EVI5O60447 810 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 GNA14O95837 355 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 CLTAP09496 248 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 EPB41P11171 864 aaKnown RBP12.25□□□□□ -0.45
SREBF1-209ENST00000470247 MATR3P43243 847 aaKnown RBP eCLIP12.25□□□□□ -0.45
SREBF1-209ENST00000470247 EPHB4P54760 987 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 OSTNP61366 133 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 KCNJ12Q14500 433 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 KRT31Q15323 416 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 UVSSAQ2YD98 709 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 XKR4Q5GH76 650 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 CNKSR3Q6P9H4 555 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 ALKAL1Q6UXT8 129 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 AGMOQ6ZNB7 445 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 ECHDC2Q86YB7 292 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 BRSK2Q8IWQ3 736 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 TRIM59Q8IWR1 403 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 TMEM199Q8N511 208 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 PARD3BQ8TEW8 1205 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 LIMA1Q9UHB6 759 aaKnown RBP12.25□□□□□ -0.45
SREBF1-209ENST00000470247 ZMYND8Q9ULU4 1186 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-209ENST00000470247 FRMD4BQ9Y2L6 1034 aa12.25□□□□□ -0.45
SREBF1-209ENST00000470247 LACTBL1A8MY62 500 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 RECQL4O94761 1208 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 CXCL8P10145 99 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 ACRP10323 421 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 SYN1P17600 705 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 EEF1GP26641 437 aaKnown RBP12.24□□□□□ -0.45
SREBF1-209ENST00000470247 DLG4P78352 724 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 CLDN10P78369 228 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 ENPEPQ07075 957 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 PSMD6Q15008 389 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 MIIPQ5JXC2 388 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 SLC24A5Q71RS6 500 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 GSTCDQ8NEC7 633 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 TMC2Q8TDI7 906 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 ZNF516Q92618 1163 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 LPPQ93052 612 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 SLC35C1Q96A29 364 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 FAM84AQ96KN4 292 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 NAP1L5Q96NT1 182 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-209ENST00000470247 ACAP3Q96P50 834 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 POP1Q99575 1024 aaKnown RBP12.24□□□□□ -0.45
SREBF1-209ENST00000470247 METTL14Q9HCE5 456 aaKnown RBP12.24□□□□□ -0.45
SREBF1-209ENST00000470247 PDE11AQ9HCR9 933 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 IL23AQ9NPF7 189 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 RNF19AQ9NV58 838 aa12.24□□□□□ -0.45
SREBF1-209ENST00000470247 ARMCX3Q9UH62 379 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-209ENST00000470247 TTC3P53804 2025 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 PTPRJQ12913 1337 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 GOLGA6L19H0YKK7 550 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 AKAP5P24588 427 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 RAB27AP51159 221 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 VAMP7P51809 220 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 FANCCQ00597 558 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 PPP3CAQ08209 521 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 BFSP1Q12934 665 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 GSE1Q14687 1217 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 ZBTB6Q15916 424 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 KYAT1Q16773 422 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 CCDC40Q4G0X9 1142 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 SCARA3Q6AZY7 606 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.45
SREBF1-209ENST00000470247 INTS8Q75QN2 995 aaKnown RBP12.23□□□□□ -0.45
SREBF1-209ENST00000470247 APBB1IPQ7Z5R6 666 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-209ENST00000470247 FAM114A1Q8IWE2 563 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 RPUSD2Q8IZ73 545 aaKnown RBP12.23□□□□□ -0.45
SREBF1-209ENST00000470247 DPF3Q92784 378 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 SNX27Q96L92 541 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 ZMAT2Q96NC0 199 aaKnown RBP12.23□□□□□ -0.45
SREBF1-209ENST00000470247 CCDC94Q9BW85 323 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-209ENST00000470247 TRIM6Q9C030 488 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-209ENST00000470247 RPF1Q9H9Y2 349 aaKnown RBP12.23□□□□□ -0.45
SREBF1-209ENST00000470247 PLEKHA5Q9HAU0 1116 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 C1orf112Q9NSG2 853 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms