RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PCBP1Q15365 356 aaKnown RBP eCLIP9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 AASDHQ4L235 1098 aaPredicted RBP9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 N4BP2L1Q5TBK1 243 aaPredicted RBP9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 FUT10Q6P4F1 479 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 PDXDC1Q6P996 788 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 RTL10Q7L3V2 364 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 SGMS1Q86VZ5 419 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 RAB11FIP4Q86YS3 637 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 BICD2Q8TD16 824 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 DNASE1L2Q92874 299 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 MAP4K1Q92918 833 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 KXD1Q9BQD3 176 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 CHRDQ9H2X0 955 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 GDE1Q9NZC3 331 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 FBXW11Q9UKB1 542 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 ADAM28Q9UKQ2 775 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 TAF6LQ9Y6J9 622 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 WDR81Q562E7 1941 aa9.93□□□□□ -0.82
SYNGAP1-205ENST00000470232 CNTNAP5Q8WYK1 1306 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 ASAP2O43150 1006 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 ATMINO43313 823 aaPredicted RBP9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 CHMP2AO43633 222 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 DKC1O60832 514 aaKnown RBP eCLIP9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 POU2F2P09086 479 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 DSC1Q08554 894 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 FZD5Q13467 585 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 RTN1Q16799 776 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 PABPC1LQ4VXU2 614 aaKnown RBP9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 LRCH2Q5VUJ6 765 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 MIER3Q7Z3K6 550 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 REXO1Q8N1G1 1221 aaKnown RBP9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 C12orf50Q8NA57 414 aaPredicted RBP9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 CRYGNQ8WXF5 182 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 SLC7A3Q8WY07 619 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 CCDC51Q96ER9 411 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 GAD1Q99259 594 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 GPR62Q9BZJ7 368 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 TRIM6Q9C030 488 aaPredicted RBP9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 LMAN1LQ9HAT1 526 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 IFT122Q9HBG6 1241 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 HEBP1Q9NRV9 189 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 NDRG2Q9UN36 371 aaKnown RBP9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 GIT1Q9Y2X7 761 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 COL4A3BPQ9Y5P4 624 aa9.92□□□□□ -0.82
SYNGAP1-205ENST00000470232 SF3B1O75533 1304 aaKnown RBP eCLIP9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 CCL16O15467 120 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 GDF9O60383 454 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 ERLIN2O94905 339 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 REC8O95072 547 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 C8AP07357 584 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 SRGAP2CP0DJJ0 459 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 XRCC6P12956 609 aaKnown RBP eCLIP9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 TDGF1P13385 188 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 RPL17P18621 184 aaKnown RBP9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 CHMLP26374 656 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 HOXA11P31270 313 aaPredicted RBP9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 SCNN1GP51170 649 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 USP11P51784 963 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 NTHL1P78549 312 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 UGCGQ16739 394 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 UBXN11Q5T124 520 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 NOTUMQ6P988 496 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 CEP68Q76N32 757 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 LONP2Q86WA8 852 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 KSR1Q8IVT5 923 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 ITFG1Q8TB96 612 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 PSPC1Q8WXF1 523 aaKnown RBP9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 FAM3CQ92520 227 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 IRF7Q92985 503 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 ELSPBP1Q96BH3 223 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 TTPALQ9BTX7 342 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 UNC45AQ9H3U1 944 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 BRD9Q9H8M2 597 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 MRPS23Q9Y3D9 190 aaKnown RBP9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 PPME1Q9Y570 386 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 IPPQ9Y573 584 aa9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 RBM8AQ9Y5S9 174 aaKnown RBP9.91□□□□□ -0.82
SYNGAP1-205ENST00000470232 CNOT1A5YKK6 2376 aaKnown RBP9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 ANKRD11Q6UB99 2663 aaPredicted RBP9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 ESYT2A0FGR8 921 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 SOBPA7XYQ1 873 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 MSH4O15457 936 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 SGSM2O43147 1006 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 ZBTB43O43298 467 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 MLH1P40692 756 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 NUCB2P80303 420 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 ELAVL2Q12926 359 aaKnown RBP9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 PSMD5Q16401 504 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 AXDND1Q5T1B0 1012 aaPredicted RBP9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 C1orf228Q6PIY5 440 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 CEP57Q86XR8 500 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 NPAS3Q8IXF0 933 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 SPEM1Q8N4L4 309 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 SMG8Q8ND04 991 aaKnown RBP9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 TCP11Q8WWU5 503 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 SLC5A5Q92911 643 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 MCRS1Q96EZ8 462 aa9.9□□□□□ -0.82
SYNGAP1-205ENST00000470232 B3GALT6Q96L58 329 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms