RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 NDNQ99608 321 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ERP44Q9BS26 406 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 MXD3Q9BW11 206 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CCSER1Q9C0I3 900 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 SIL1Q9H173 461 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ADNPQ9H2P0 1102 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CENPHQ9H3R5 247 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ELAC1Q9H777 363 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 L2HGDHQ9H9P8 463 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 TRPV4Q9HBA0 871 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 KIAA1586Q9HCI6 787 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ABCB6Q9NP58 842 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ALG13Q9NP73 1137 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 C8orf4Q9NR00 106 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 KCND1Q9NSA2 647 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 BLOC1S4Q9NUP1 217 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 USP40Q9NVE5 1235 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ANO10Q9NW15 660 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 HPF1Q9NWY4 346 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 NKIRAS2Q9NYR9 191 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 TAS2R7Q9NYW3 318 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 IL37Q9NZH6 218 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 PDP2Q9P2J9 529 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 GMPR2Q9P2T1 348 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ASIC3Q9UHC3 531 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 SLC7A8Q9UHI5 535 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 AMACRQ9UHK6 382 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 TEKT2Q9UIF3 430 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 HOOK1Q9UJC3 728 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 SH3BGRL2Q9UJC5 107 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 VANGL2Q9ULK5 521 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 LIMCH1Q9UPQ0 1083 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 C15orf41Q9Y2V0 281 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CHTOPQ9Y3Y2 248 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 AFG3L2Q9Y4W6 797 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 DGKBQ9Y6T7 804 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ANKRD36BQ8N2N9 1353 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 A0A0G2JPF8 293 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 FRMD3A2A2Y4 597 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 SYNDIG1LA6NDD5 238 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 HNRNPCL3B7ZW38 293 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 GOLGA8MH3BSY2 632 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 PSMD9O00233 223 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 PFDN1O60925 122 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 GUCY1B2O75343 617 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 SUPT3HO75486 399 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 TSPAN9O75954 239 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 USP1O94782 785 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 TOMM70O94826 608 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 LCA5LO95447 670 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 TBC1D8O95759 1140 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 MT-ND3P03897 115 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 TUBB4AP04350 444 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 CYP3A4P08684 503 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ENO2P09104 434 aaPredicted RBP5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ALOX5P09917 674 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 HNRNPCL4P0DMR1 293 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 CYP2C9P11712 490 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 CPA3P15088 417 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 HSPA6P17066 643 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 TMEM11P17152 192 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 POU3F3P20264 500 aaPredicted RBP5.49□□□□□ -1.53
COL3A1-205ENST00000470167 GARTP22102 1010 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ITGA6P23229 1130 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 JAK1P23458 1154 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 DNAJB1P25685 340 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 TKTP29401 623 aaKnown RBP5.49□□□□□ -1.53
COL3A1-205ENST00000470167 AARSP49588 968 aaKnown RBP eCLIP5.49□□□□□ -1.53
COL3A1-205ENST00000470167 VEGFBP49765 207 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 RENBPP51606 427 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 HADHBP55084 474 aaKnown RBP5.49□□□□□ -1.53
COL3A1-205ENST00000470167 KRT85P78386 507 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ARID5AQ03989 594 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 KDSRQ06136 332 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 MCL1Q07820 350 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 SPEM2Q0P670 501 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ITGB3BPQ13352 177 aaPredicted RBP5.49□□□□□ -1.53
COL3A1-205ENST00000470167 SMAD4Q13485 552 aaKnown RBP5.49□□□□□ -1.53
COL3A1-205ENST00000470167 SERINC3Q13530 473 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 GNL2Q13823 731 aaKnown RBP5.49□□□□□ -1.53
COL3A1-205ENST00000470167 UBE3CQ15386 1083 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ZNF124Q15973 351 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ADRM1Q16186 407 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 C5orf22Q49AR2 442 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 AARDQ4LEZ3 155 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 KCNT1Q5JUK3 1230 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ZMYM1Q5SVZ6 1142 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 METTL2BQ6P1Q9 378 aaKnown RBP5.49□□□□□ -1.53
COL3A1-205ENST00000470167 SLC4A10Q6U841 1118 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 NXPE4Q6UWF7 544 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 B3GNT6Q6ZMB0 384 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 MFSD6Q6ZSS7 791 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 LPCAT2Q7L5N7 544 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 EEPD1Q7L9B9 569 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 PHLDB2Q86SQ0 1253 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ARHGAP18Q8N392 663 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 SLC4A11Q8NBS3 891 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 IL17RDQ8NFM7 739 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 OR6P1Q8NGX9 317 aa5.49□□□□□ -1.53
COL3A1-205ENST00000470167 ENKURQ8TC29 256 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms