RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 SPOPO43791 374 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 CFHP08603 1231 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 NLRP11P59045 1033 aaKnown RBP10.14□□□□□ -0.79
TOP3A-203ENST00000469739 GTF2BQ00403 316 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 MAP3K10Q02779 954 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 SNX1Q13596 522 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 VGLL4Q14135 290 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 PPP2R5AQ15172 486 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 LY6KQ17RY6 165 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 ZFYVE27Q5T4F4 411 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 GIMAP7Q8NHV1 300 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 OLIG1Q8TAK6 271 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 PARD3BQ8TEW8 1205 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 TRAPPC12Q8WVT3 735 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 KLRG1Q96E93 195 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 RNPC3Q96LT9 517 aaKnown RBP10.14□□□□□ -0.79
TOP3A-203ENST00000469739 ACAD9Q9H845 621 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 ZNF408Q9H9D4 720 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 AS3MTQ9HBK9 375 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 LRRC4CQ9HCJ2 640 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 DNAJC17Q9NVM6 304 aaKnown RBP10.14□□□□□ -0.79
TOP3A-203ENST00000469739 TSKSQ9UJT2 592 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 PPP1R12AO14974 1030 aaPredicted RBP10.13□□□□□ -0.79
TOP3A-203ENST00000469739 SLC26A4O43511 780 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 VPS41P49754 854 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 JAK3P52333 1124 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 EPHB4P54760 987 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 PDCLQ13371 301 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 IFI16Q16666 785 aaKnown RBP10.13□□□□□ -0.79
TOP3A-203ENST00000469739 CEP85LQ5SZL2 805 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 GJC2Q5T442 439 aaPredicted RBP10.13□□□□□ -0.79
TOP3A-203ENST00000469739 OTUD6AQ7L8S5 288 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 RFFLQ8WZ73 363 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 ZNF653Q96CK0 615 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 JPH2Q9BR39 696 aaPredicted RBP10.13□□□□□ -0.79
TOP3A-203ENST00000469739 STRA6Q9BX79 667 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 CYP26B1Q9NR63 512 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 SNX24Q9Y343 169 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 TUBBP07437 444 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 COMTP21964 271 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 TRIP13Q15645 432 aaPredicted RBP10.13□□□□□ -0.79
TOP3A-203ENST00000469739 TTMPQ5BVD1 217 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 FAM76AQ8TAV0 307 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 ATP6V0A1Q93050 837 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 FNBP1Q96RU3 617 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.13□□□□□ -0.796e-7■■■□□ 15.1
TOP3A-203ENST00000469739 MTFR1LQ9H019 292 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 KCND2Q9NZV8 630 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 BTBD7Q9P203 1132 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 DBR1Q9UK59 544 aaKnown RBP10.13□□□□□ -0.79
TOP3A-203ENST00000469739 USTQ9Y2C2 406 aa10.13□□□□□ -0.79
TOP3A-203ENST00000469739 GTPBP10A4D1E9 387 aaKnown RBP10.12□□□□□ -0.79
TOP3A-203ENST00000469739 EBAG9O00559 213 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 IRF6O14896 467 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 PSAPP07602 524 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 CD58P19256 250 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 SCP2P22307 547 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 IGBP1P78318 339 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 KRT39Q6A163 491 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 NEK9Q8TD19 979 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 ASAP3Q8TDY4 903 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 EPS8L1Q8TE68 723 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 C18orf8Q96DM3 657 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 IFT74Q96LB3 600 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 KLHL11Q9NVR0 708 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 FAM169AQ9Y6X4 670 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 PTPRJQ12913 1337 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 TLDC2A0PJX2 215 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 CHRNB2P17787 502 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 ATP4AP20648 1035 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 PLTPP55058 493 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 DHX9Q08211 1270 aaKnown RBP10.12□□□□□ -0.79
TOP3A-203ENST00000469739 PAK2Q13177 524 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 TAS1R3Q7RTX0 852 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 CCDC25Q86WR0 208 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 LMBR1Q8WVP7 490 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 COPS5Q92905 334 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 TACO1Q9BSH4 297 aaKnown RBP10.12□□□□□ -0.79
TOP3A-203ENST00000469739 NUP85Q9BW27 656 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 RAB20Q9NX57 234 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 ATP8A1Q9Y2Q0 1164 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 DOCK1Q14185 1865 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 EDN1P05305 212 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 CCT5P48643 541 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 NNTQ13423 1086 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 EMC2Q15006 297 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 SKIV2LQ15477 1246 aaKnown RBP10.12□□□□□ -0.79
TOP3A-203ENST00000469739 UBAP2Q5T6F2 1119 aaKnown RBP10.12□□□□□ -0.79
TOP3A-203ENST00000469739 SCARA5Q6ZMJ2 495 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 CATSPERGQ6ZRH7 1159 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 FBXL13Q8NEE6 735 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 ZNF516Q92618 1163 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 NT5C1BQ96P26 610 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 HEMGNQ9BXL5 484 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 GPRC5DQ9NZD1 345 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 PLAAQ9Y263 795 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 CD2APQ9Y5K6 639 aa10.12□□□□□ -0.79
TOP3A-203ENST00000469739 IVNS1ABPQ9Y6Y0 642 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms