RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 PRPF31Q8WWY3 499 aaKnown RBP6.48□□□□□ -1.37
SHQ1-205ENST00000468371 KIFAP3Q92845 792 aa6.48□□□□□ -1.37
SHQ1-205ENST00000468371 MTMR8Q96EF0 704 aa6.48□□□□□ -1.37
SHQ1-205ENST00000468371 EIF3CQ99613 913 aaKnown RBP6.48□□□□□ -1.37
SHQ1-205ENST00000468371 POLD4Q9HCU8 107 aa6.48□□□□□ -1.37
SHQ1-205ENST00000468371 UBN1Q9NPG3 1134 aa6.48□□□□□ -1.37
SHQ1-205ENST00000468371 SPG21Q9NZD8 308 aa6.48□□□□□ -1.37
SHQ1-205ENST00000468371 SSX2IPQ9Y2D8 614 aa6.48□□□□□ -1.37
SHQ1-205ENST00000468371 CTDNEP1O95476 244 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 TUBBP07437 444 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CYP3A4P08684 503 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 GBP2P32456 591 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 MRPS5P82675 430 aaKnown RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 ZFYVE27Q5T4F4 411 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 MOXD1Q6UVY6 613 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 NPAS4Q8IUM7 802 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 GLYCTKQ8IVS8 523 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 FAM178BQ8IXR5 827 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 MORC4Q8TE76 937 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 GJA10Q969M2 543 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 EMID1Q96A84 441 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 FNBP1Q96RU3 617 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 RMND1Q9NWS8 449 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 FBXL21Q9UKT6 434 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 TLDC2A0PJX2 215 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 POTEMA6NI47 508 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 ZBTB24O43167 697 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 PRR29P0C7W0 189 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 H2AFXP16104 143 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CXCR5P32302 372 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 PEX3P56589 373 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 SP2Q02086 613 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 WHAMMP3Q1A5X7 153 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 HERC4Q5GLZ8 1057 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 ZNF410Q86VK4 478 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 GPBP1Q86WP2 473 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 METTL23Q86XA0 190 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 OXER1Q8TDS5 423 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 RIN2Q8WYP3 895 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 EPSTI1Q96J88 318 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 NAA15Q9BXJ9 866 aaKnown RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 PRMT7Q9NVM4 692 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 EPN1Q9Y6I3 576 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 HGSO14964 777 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 GJB5O95377 273 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 KRT19P08727 400 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 TUBB4BP68371 445 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 ZNF568Q3ZCX4 644 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 TCERG1LQ5VWI1 586 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 SPATA1Q5VX52 437 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 PLPP4Q5VZY2 271 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 C8orf74Q6P047 294 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 SHC4Q6S5L8 630 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 DSTYKQ6XUX3 929 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CCDC121Q6ZUS5 278 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 LRRC43Q8N309 656 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CSGALNACT2Q8N6G5 542 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 ENGASEQ8NFI3 743 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 APOL5Q9BWW9 433 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 PBX4Q9BYU1 374 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 MRPL44Q9H9J2 332 aaKnown RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 PPANQ9NQ55 473 aaKnown RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 FAM207AQ9NSI2 230 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 ANKEF1Q9NU02 776 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 PCDHB6Q9Y5E3 794 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 MRFAP1Q9Y605 127 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 COL1A2P08123 1366 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 NAV1Q8NEY1 1877 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 TMEM265A0A087WTH1 108 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 KCNJ18B7U540 433 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 K7ENM7 598 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CXCL14O95715 111 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 FGFR4P22455 802 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CDK7P50613 346 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 WDR5P61964 334 aaKnown RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 VSNL1P62760 191 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CYP27A1Q02318 531 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 KCNJ12Q14500 433 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 TYW1BQ6NUM6 668 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 LLGL2Q6P1M3 1020 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 TMEM192Q8IY95 271 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 OR8K1Q8NGG5 319 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 SECISBP2LQ93073 1101 aaKnown RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 ACSF2Q96CM8 615 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 GCNAQ96QF7 691 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CAPS2Q9BXY5 557 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 IMPG2Q9BZV3 1241 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CXXC1Q9P0U4 656 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-205ENST00000468371 PPME1Q9Y570 386 aa6.47□□□□□ -1.37
SHQ1-205ENST00000468371 CUL9Q8IWT3 2517 aa6.46□□□□□ -1.37
SHQ1-205ENST00000468371 DPYSL4O14531 572 aa6.46□□□□□ -1.37
SHQ1-205ENST00000468371 PRKCBP05771 671 aa6.46□□□□□ -1.37
SHQ1-205ENST00000468371 MYBP10242 640 aa6.46□□□□□ -1.37
SHQ1-205ENST00000468371 SP100P23497 879 aaPredicted RBP6.46□□□□□ -1.37
SHQ1-205ENST00000468371 ABCD1P33897 745 aa6.46□□□□□ -1.37
SHQ1-205ENST00000468371 NOVP48745 357 aa6.46□□□□□ -1.37
SHQ1-205ENST00000468371 SLC7A5Q01650 507 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms