RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 LRRC15Q8TF66 581 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 SLC22A17Q8WUG5 538 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 HERC2P3Q9BVR0 1158 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 MRPL4Q9BYD3 311 aaKnown RBP18.79■□□□□ 0.6
SSBP1-207ENST00000468267 PTPRHQ9HD43 1115 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 MRPL17Q9NRX2 175 aaKnown RBP18.79■□□□□ 0.6
SSBP1-207ENST00000468267 BLOC1S4Q9NUP1 217 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 GDAQ9Y2T3 454 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 CITO14578 2027 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 STX6O43752 255 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 THP07101 528 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 PLCG1P19174 1290 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 MARCKSP29966 332 aaPredicted RBP18.78■□□□□ 0.6
SSBP1-207ENST00000468267 SMTNP53814 917 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 TUSC3Q13454 348 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 KARSQ15046 597 aaKnown RBP18.78■□□□□ 0.6
SSBP1-207ENST00000468267 TPRNQ4KMQ1 711 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 PPFIBP1Q86W92 1011 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 TMEM161BQ8NDZ6 487 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 KLHL5Q96PQ7 755 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 C1QTNF1Q9BXJ1 281 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 EMILIN2Q9BXX0 1053 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 CCSER1Q9C0I3 900 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 CXCL16Q9H2A7 254 aa18.78■□□□□ 0.6
SSBP1-207ENST00000468267 ZSCAN16Q9H4T2 348 aaPredicted RBP18.78■□□□□ 0.6
SSBP1-207ENST00000468267 SRPRBQ9Y5M8 271 aaKnown RBP18.78■□□□□ 0.6
SSBP1-207ENST00000468267 CNPP09543 421 aaKnown RBP18.77■□□□□ 0.6
SSBP1-207ENST00000468267 MAPTP10636 758 aaKnown RBP18.77■□□□□ 0.6
SSBP1-207ENST00000468267 EPCAMP16422 314 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 NAB2Q15742 525 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 KIAA0319Q5VV43 1072 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 GPBP1Q86WP2 473 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 RAD54LQ92698 747 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 EPSTI1Q96J88 318 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 TARS2Q9BW92 718 aaKnown RBP18.77■□□□□ 0.6
SSBP1-207ENST00000468267 APOL5Q9BWW9 433 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 CDT1Q9H211 546 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 FBXO2Q9UK22 296 aaPredicted RBP18.77■□□□□ 0.6
SSBP1-207ENST00000468267 ADAM28Q9UKQ2 775 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 ODF2LQ9ULJ1 636 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 SSX2IPQ9Y2D8 614 aa18.77■□□□□ 0.6
SSBP1-207ENST00000468267 URODP06132 367 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 PROZP22891 400 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 KLRC2P26717 231 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 GLUD2P49448 558 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 CEBPZQ03701 1054 aaKnown RBP18.76■□□□□ 0.59
SSBP1-207ENST00000468267 STRN3Q13033 797 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 DHX8Q14562 1220 aaKnown RBP18.76■□□□□ 0.59
SSBP1-207ENST00000468267 MCM6Q14566 821 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 HSP90AA2PQ14568 343 aaPredicted RBP18.76■□□□□ 0.59
SSBP1-207ENST00000468267 CBX2Q14781 532 aaPredicted RBP18.76■□□□□ 0.59
SSBP1-207ENST00000468267 USP49Q70CQ1 688 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 RASSF8Q8NHQ8 419 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 RABGGTAQ92696 567 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 REEP2Q9BRK0 252 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 PAAF1Q9BRP4 392 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 PHF7Q9BWX1 381 aaPredicted RBP18.76■□□□□ 0.59
SSBP1-207ENST00000468267 GPR62Q9BZJ7 368 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 CHST7Q9NS84 486 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 DZANK1Q9NVP4 752 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 LARSQ9P2J5 1176 aaKnown RBP18.76■□□□□ 0.59
SSBP1-207ENST00000468267 CACNG4Q9UBN1 327 aa18.76■□□□□ 0.59
SSBP1-207ENST00000468267 MORC2Q9Y6X9 1032 aaPredicted RBP18.76■□□□□ 0.59
SSBP1-207ENST00000468267 LOC730098B7Z3J9 87 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 C2CD2LO14523 706 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 ABLIM1O14639 778 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 TADA2AO75478 443 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 BRD1O95696 1058 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 MCF2P10911 925 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 DDIT3P35638 169 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 GRM5P41594 1212 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 CLCN4P51793 760 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 DSG1Q02413 1049 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 ITIH3Q06033 890 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 USP41Q3LFD5 358 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 ZNF568Q3ZCX4 644 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 SPECC1Q5M775 1068 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 FUT10Q6P4F1 479 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 MPZL3Q6UWV2 235 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 ZBTB33Q86T24 672 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 HSCBQ8IWL3 235 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 CLIC6Q96NY7 704 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 USP28Q96RU2 1077 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 TCHPQ9BT92 498 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 CCDC94Q9BW85 323 aaPredicted RBP18.75■□□□□ 0.59
SSBP1-207ENST00000468267 ADAM7Q9H2U9 754 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 RXFP1Q9HBX9 757 aa18.75■□□□□ 0.59
SSBP1-207ENST00000468267 MYH15Q9Y2K3 1946 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 MTCL1Q9Y4B5 1905 aaKnown RBP18.74■□□□□ 0.59
SSBP1-207ENST00000468267 MYO10Q9HD67 2058 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 CASTOR2A6NHX0 329 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 H0YCG3 227 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 ALADP13716 330 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 ZNF131P52739 623 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 NCKAP1LP55160 1127 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 SLC39A14Q15043 492 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 KIAA1841Q6NSI8 718 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 CES5AQ6NT32 575 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 ALKAL1Q6UXT8 129 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 GPR65Q8IYL9 337 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms