RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 KCNC3Q14003 757 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 KARSQ15046 597 aaKnown RBP16.03■□□□□ 0.16
COMMD3-206ENST00000468179 ZNF568Q3ZCX4 644 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 EEF1DP3Q658K8 133 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 KIAA1841Q6NSI8 718 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 ANKRD54Q6NXT1 300 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 ELMSAN1Q6PJG2 1045 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 GPR65Q8IYL9 337 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 KRI1Q8N9T8 703 aaKnown RBP16.03■□□□□ 0.16
COMMD3-206ENST00000468179 GSTCDQ8NEC7 633 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 PRUNE2Q8WUY3 3088 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 BCL7CQ8WUZ0 217 aaPredicted RBP16.03■□□□□ 0.16
COMMD3-206ENST00000468179 LARP4BQ92615 738 aaKnown RBP16.03■□□□□ 0.16
COMMD3-206ENST00000468179 HERC2P3Q9BVR0 1158 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 DZANK1Q9NVP4 752 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 STK17AQ9UEE5 414 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 DPP7Q9UHL4 492 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 FBXO2Q9UK22 296 aaPredicted RBP16.03■□□□□ 0.16
COMMD3-206ENST00000468179 B4GALT3O60512 393 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 TBCAO75347 108 aaKnown RBP16.02■□□□□ 0.16
COMMD3-206ENST00000468179 TADA2AO75478 443 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 MCF2P10911 925 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 GRM5P41594 1212 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 CREMQ03060 361 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 GRIN1Q05586 938 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 DHX8Q14562 1220 aaKnown RBP16.02■□□□□ 0.16
COMMD3-206ENST00000468179 STK38Q15208 465 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 PTPN14Q15678 1187 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 ARSHQ5FYA8 562 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 RRAGBQ5VZM2 374 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 CES5AQ6NT32 575 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 MPZL3Q6UWV2 235 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 ZPBP2Q6X784 338 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 MYCT1Q8N699 235 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 TMEM161BQ8NDZ6 487 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 MS4A3Q96HJ5 214 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 TARS2Q9BW92 718 aaKnown RBP16.02■□□□□ 0.16
COMMD3-206ENST00000468179 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 PARVGQ9HBI0 331 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 USP20Q9Y2K6 914 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 GDAQ9Y2T3 454 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 HCFC2Q9Y5Z7 792 aa16.02■□□□□ 0.16
COMMD3-206ENST00000468179 MYO7AQ13402 2215 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 TOM1L1O75674 476 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 MAPTP10636 758 aaKnown RBP16.01■□□□□ 0.15
COMMD3-206ENST00000468179 KLRC2P26717 231 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 NASPP49321 788 aaPredicted RBP16.01■□□□□ 0.15
COMMD3-206ENST00000468179 GLUD2P49448 558 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 ZP2Q05996 745 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 ITIH3Q06033 890 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 ELAVL2Q12926 359 aaKnown RBP16.01■□□□□ 0.15
COMMD3-206ENST00000468179 MCM6Q14566 821 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 HSP90AA2PQ14568 343 aaPredicted RBP16.01■□□□□ 0.15
COMMD3-206ENST00000468179 KYAT1Q16773 422 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 USP41Q3LFD5 358 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 FAM173BQ6P4H8 233 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 CCDC73Q6ZRK6 1079 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 VN1R2Q8NFZ6 395 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 KCNN1Q92952 543 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 EPSTI1Q96J88 318 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 UROC1Q96N76 676 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 ACAP3Q96P50 834 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 USP28Q96RU2 1077 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 REEP2Q9BRK0 252 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 CDT1Q9H211 546 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 PTPRHQ9HD43 1115 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.01■□□□□ 0.15
COMMD3-206ENST00000468179 BLOC1S4Q9NUP1 217 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 MARCH5Q9NX47 278 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 ADAM28Q9UKQ2 775 aa16.01■□□□□ 0.15
COMMD3-206ENST00000468179 USP15Q9Y4E8 981 aaPredicted RBP16.01■□□□□ 0.15
COMMD3-206ENST00000468179 NPHP3-ACAD11A0A0J9YXS1 232 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 CLDN3O15551 220 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 BRD1O95696 1058 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 EDN1P05305 212 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 ALADP13716 330 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 NCKAP1LP55160 1127 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 ATL3Q6DD88 541 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 FUT10Q6P4F1 479 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 SV2BQ7L1I2 683 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 TAS1R3Q7RTX0 852 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 HAUS6Q7Z4H7 955 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 AUTS2Q8WXX7 1259 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 BICD1Q96G01 975 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 KLHL5Q96PQ7 755 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 PHF7Q9BWX1 381 aaPredicted RBP16■□□□□ 0.15
COMMD3-206ENST00000468179 VN1R3Q9BXE9 311 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 ZHX3Q9H4I2 956 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 SLC38A7Q9NVC3 462 aa16■□□□□ 0.15
COMMD3-206ENST00000468179 GTF3C5Q9Y5Q8 519 aaPredicted RBP16■□□□□ 0.15
COMMD3-206ENST00000468179 SF3B1O75533 1304 aaKnown RBP eCLIP16■□□□□ 0.153e-6■■■■■ 44.6
COMMD3-206ENST00000468179 TCF20Q9UGU0 1960 aaKnown RBP16■□□□□ 0.15
COMMD3-206ENST00000468179 PTGESO14684 152 aa15.99■□□□□ 0.15
COMMD3-206ENST00000468179 SPTLC2O15270 562 aa15.99■□□□□ 0.15
COMMD3-206ENST00000468179 TRAK2O60296 914 aa15.99■□□□□ 0.15
COMMD3-206ENST00000468179 LILRB3O75022 631 aa15.99■□□□□ 0.15
COMMD3-206ENST00000468179 PPP6R2O75170 966 aa15.99■□□□□ 0.15
COMMD3-206ENST00000468179 C1RP00736 705 aa15.99■□□□□ 0.15
COMMD3-206ENST00000468179 ADH1AP07327 375 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms