RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 EIF2AQ9BY44 585 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-211ENST00000467553 GBP3Q9H0R5 595 aa15.49■□□□□ 0.07
CCHCR1-211ENST00000467553 POMKQ9H5K3 350 aa15.49■□□□□ 0.07
CCHCR1-211ENST00000467553 PRMT7Q9NVM4 692 aaPredicted RBP15.49■□□□□ 0.07
CCHCR1-211ENST00000467553 FBXO2Q9UK22 296 aaPredicted RBP15.49■□□□□ 0.07
CCHCR1-211ENST00000467553 IPPQ9Y573 584 aa15.49■□□□□ 0.07
CCHCR1-211ENST00000467553 ZDBF2Q9HCK1 2354 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 SLC26A4O43511 780 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 LILRB3O75022 631 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 PRKCBP05771 671 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 KLRC2P26717 231 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 CLCN4P51793 760 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 SLC39A14Q15043 492 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 STK38Q15208 465 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 MAPK6Q16659 721 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 RARS2Q5T160 578 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 CDCA2Q69YH5 1023 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 USP49Q70CQ1 688 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 TDRD5Q8NAT2 981 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 SMG8Q8ND04 991 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 CMASQ8NFW8 434 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 HDAC7Q8WUI4 952 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 BCL7CQ8WUZ0 217 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 ACSF2Q96CM8 615 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 PRIMPOLQ96LW4 560 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 KLHL5Q96PQ7 755 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 KIFC3Q9BVG8 833 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 APOL6Q9BWW8 343 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 TRIM6Q9C030 488 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 FZD8Q9H461 694 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 TSHZ2Q9NRE2 1034 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 USP20Q9Y2K6 914 aa15.48■□□□□ 0.07
CCHCR1-211ENST00000467553 TDRD15B5MCY1 1934 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 NPHP3-ACAD11A0A0J9YXS1 232 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 ARL5CA6NH57 179 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 C2CD4DB7Z1M9 353 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 K7ERI5 159 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 NPTXRO95502 500 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 F13A1P00488 732 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 POMCP01189 267 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 URODP06132 367 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 ADH1AP07327 375 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 EPCAMP16422 314 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 PLCG1P19174 1290 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 MRE11P49959 708 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 SLC12A3P55017 1021 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 DSC1Q08554 894 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 PRPF4BQ13523 1007 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 SLC27A1Q6PCB7 646 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 OTOP3Q7RTS5 596 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 GPR149Q86SP6 731 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 COLGALT2Q8IYK4 626 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 DAW1Q8N136 415 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 KREMEN2Q8NCW0 462 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 DRC1Q96MC2 740 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 RPS6KC1Q96S38 1066 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 HERC2P3Q9BVR0 1158 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 COLEC11Q9BWP8 271 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 VN1R3Q9BXE9 311 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 PANK2Q9BZ23 570 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 CCSER1Q9C0I3 900 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 RNF39Q9H2S5 420 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 KMT5AQ9NQR1 393 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 CCDC39Q9UFE4 941 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 HES2Q9Y543 173 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 MYH11P35749 1972 aa15.47■□□□□ 0.07
CCHCR1-211ENST00000467553 A0A1B0GUA9 196 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 TTLL13PA6NNM8 815 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 ACKR2O00590 384 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 CNPP09543 421 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 GUCY2CP25092 1073 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 AVPR2P30518 371 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 NPTX2P47972 431 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 EFNA5P52803 228 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 CREMQ03060 361 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 DMP1Q13316 513 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 PKP1Q13835 747 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 MCM6Q14566 821 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 FAM187BQ17R55 369 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 GPBP1Q86WP2 473 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 RNF168Q8IYW5 571 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 KRI1Q8N9T8 703 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 LRRC15Q8TF66 581 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 AUTS2Q8WXX7 1259 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 TIPINQ9BVW5 301 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 RXFP1Q9HBX9 757 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 BLOC1S4Q9NUP1 217 aa15.46■□□□□ 0.07
CCHCR1-211ENST00000467553 DENND4AQ7Z401 1863 aa15.46■□□□□ 0.06
CCHCR1-211ENST00000467553 KMT2EQ8IZD2 1858 aa15.46■□□□□ 0.06
CCHCR1-211ENST00000467553 MYH15Q9Y2K3 1946 aa15.45■□□□□ 0.06
CCHCR1-211ENST00000467553 SPDYE4A6NLX3 237 aa15.45■□□□□ 0.06
CCHCR1-211ENST00000467553 SPTLC2O15270 562 aa15.45■□□□□ 0.06
CCHCR1-211ENST00000467553 PAPLNO95428 1278 aa15.45■□□□□ 0.06
CCHCR1-211ENST00000467553 EFEMP2O95967 443 aa15.45■□□□□ 0.06
CCHCR1-211ENST00000467553 KRT18P05783 430 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-211ENST00000467553 DDIT3P35638 169 aa15.45■□□□□ 0.06
CCHCR1-211ENST00000467553 TXLNAP40222 546 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms