RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 POU2F2P09086 479 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 CCDC192P0DO97 292 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 CALM1P0DP23 149 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 CALM2P0DP24 149 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 CALM3P0DP25 149 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 CCNE1P24864 410 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 GDI1P31150 447 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 TARBP2Q15633 366 aaKnown RBP11.47□□□□□ -0.57
HDAC3-203ENST00000467533 SLC5A9Q2M3M2 681 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 SOWAHCQ53LP3 525 aaPredicted RBP11.47□□□□□ -0.57
HDAC3-203ENST00000467533 PLA2G2CQ5R387 149 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 AXDND1Q5T1B0 1012 aaPredicted RBP11.47□□□□□ -0.57
HDAC3-203ENST00000467533 SH3PXD2AQ5TCZ1 1133 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 JAKMIP3Q5VZ66 844 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 TCEAL6Q6IPX3 200 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 KIAA1211LQ6NV74 962 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 Q6ZS52 159 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 TMTC3Q6ZXV5 915 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 CACNA2D4Q7Z3S7 1137 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 CEP57Q86XR8 500 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 TEX2Q8IWB9 1127 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 MB21D2Q8IYB1 491 aaPredicted RBP11.47□□□□□ -0.57
HDAC3-203ENST00000467533 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
HDAC3-203ENST00000467533 RABGGTAQ92696 567 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 TCEAL3Q969E4 200 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 ZFP42Q96MM3 310 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 CLSTN3Q9BQT9 956 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 APOL6Q9BWW8 343 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 IL25Q9H293 177 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 ZFP14Q9HCL3 533 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 ZNF334Q9HCZ1 680 aaPredicted RBP11.47□□□□□ -0.57
HDAC3-203ENST00000467533 VPS45Q9NRW7 570 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 RBM12Q9NTZ6 932 aaKnown RBP11.47□□□□□ -0.57
HDAC3-203ENST00000467533 MIOSQ9NXC5 875 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 IPPQ9Y573 584 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 PCDHGA5Q9Y5G8 931 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 WDFY3Q8IZQ1 3526 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 FLNBO75369 2602 aaKnown RBP11.46□□□□□ -0.57
HDAC3-203ENST00000467533 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 SMCO2A6NFE2 343 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 C4orf47A7E2U8 309 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 RPP40O75818 363 aaKnown RBP11.46□□□□□ -0.57
HDAC3-203ENST00000467533 RHOP08100 348 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 FCARP24071 287 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 CLK2P49760 499 aaKnown RBP11.46□□□□□ -0.57
HDAC3-203ENST00000467533 PRR16Q569H4 304 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 DAB2IPQ5VWQ8 1189 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 KBTBD6Q86V97 674 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 HASPINQ8TF76 798 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 GAB3Q8WWW8 586 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 PIK3R5Q8WYR1 880 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 TTPALQ9BTX7 342 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 IFT122Q9HBG6 1241 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 HES2Q9Y543 173 aa11.46□□□□□ -0.57
HDAC3-203ENST00000467533 EML5Q05BV3 1969 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 VWA8A3KMH1 1905 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 IGKV6-21A0A0C4DH24 114 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 EIF4E1BA6NMX2 242 aaKnown RBP11.45□□□□□ -0.58
HDAC3-203ENST00000467533 ADAM12O43184 909 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 PRC1O43663 620 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 ERLIN2O94905 339 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 CYP3A4P08684 503 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 HOXC13P31276 330 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 RAP1GAPP47736 663 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 JAK3P52333 1124 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
HDAC3-203ENST00000467533 XKR3Q5GH77 459 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 FAM171A1Q5VUB5 890 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 PDZD3Q86UT5 571 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 EIF2AQ9BY44 585 aaKnown RBP11.45□□□□□ -0.58
HDAC3-203ENST00000467533 GLT8D2Q9H1C3 349 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 TRPV5Q9NQA5 729 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 ANKFY1Q9P2R3 1169 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 CACNG4Q9UBN1 327 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 NEUROG3Q9Y4Z2 214 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 COL4A3BPQ9Y5P4 624 aa11.45□□□□□ -0.58
HDAC3-203ENST00000467533 F5P12259 2224 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 SH2B2O14492 632 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-203ENST00000467533 ZNF263O14978 683 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 GAS7O60861 476 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 PSMC3P17980 439 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 HOXA11P31270 313 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-203ENST00000467533 SFNP31947 248 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 GRIK3Q13003 919 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 UVSSAQ2YD98 709 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 FAM78AQ5JUQ0 283 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 C19orf48Q6RUI8 117 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 VITQ6UXI7 678 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 SRGAP1Q7Z6B7 1085 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 MICU3Q86XE3 530 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 MAP4K3Q8IVH8 894 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 HACE1Q8IYU2 909 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 LNX1Q8TBB1 728 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-203ENST00000467533 FAM200AQ8TCP9 573 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 CSGALNACT1Q8TDX6 532 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 DEPDC1BQ8WUY9 529 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 CRYGNQ8WXF5 182 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 MSANTD3Q96H12 275 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 CEP89Q96ST8 783 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms