RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 EDNRBP24530 442 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 GTF2H1P32780 548 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 GPC5P78333 572 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
HPS1-208ENST00000467246 STRN3Q13033 797 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 RHOT2Q8IXI1 618 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 SLC7A3Q8WY07 619 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 CAVIN3Q969G5 261 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 ASCC2Q9H1I8 757 aaPredicted RBP12.31□□□□□ -0.44
HPS1-208ENST00000467246 RNF181Q9P0P0 153 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 NR2E1Q9Y466 385 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 PTPRFP10586 1907 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 EXTL3O43909 919 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 FGGP02679 453 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 EDN1P05305 212 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 PGK2P07205 417 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 ARL2P36404 184 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 LMAN1P49257 510 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 ERVK-9P63128 1117 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 ZNF211Q13398 564 aaPredicted RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 LY6KQ17RY6 165 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 ZBTB41Q5SVQ8 909 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 NAA35Q5VZE5 725 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 USP37Q86T82 979 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 ALG3Q92685 438 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 CALR3Q96L12 384 aaKnown RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 NIFKQ9BYG3 293 aaKnown RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 FAM204AQ9H8W3 233 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 AGO2Q9UKV8 859 aaKnown RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 PTPRJQ12913 1337 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 A0A0G2JLL6 359 aaPredicted RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 TMEM110-MUSTN1A8MSY1 372 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 H0YCG3 227 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 K7ERI5 159 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 CNMDO75829 334 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 GZMAP12544 262 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 DRP2Q13474 957 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 CRELD2Q6UXH1 353 aaPredicted RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 C15orf39Q6ZRI6 1047 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 PRRT2Q7Z6L0 340 aaPredicted RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 ADAT2Q7Z6V5 191 aaKnown RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 DEPTORQ8TB45 409 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 PSPC1Q8WXF1 523 aaKnown RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 TARS2Q9BW92 718 aaKnown RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 TXNRD2Q9NNW7 524 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 AMACRQ9UHK6 382 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 LOC285556D6RIA3 1793 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 GGPS1O95749 300 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 KRT5P13647 590 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 TNNI1P19237 187 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 TCF7P36402 384 aaPredicted RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 NAMPTP43490 491 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 STAT5BP51692 787 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 PAK2Q13177 524 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 DDX42Q86XP3 938 aaKnown RBP eCLIP12.3□□□□□ -0.44
HPS1-208ENST00000467246 DDX1Q92499 740 aaKnown RBP12.3□□□□□ -0.44
HPS1-208ENST00000467246 ANKFY1Q9P2R3 1169 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 STYXL1Q9Y6J8 313 aa12.3□□□□□ -0.44
HPS1-208ENST00000467246 DICER1Q9UPY3 1922 aaKnown RBP12.29□□□□□ -0.44
HPS1-208ENST00000467246 ARIH2O95376 493 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 IREB2P48200 963 aaKnown RBP12.29□□□□□ -0.44
HPS1-208ENST00000467246 PDE6CP51160 858 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 HADHBP55084 474 aaKnown RBP12.29□□□□□ -0.44
HPS1-208ENST00000467246 CDR2Q01850 454 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 MESDQ14696 234 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 TARBP2Q15633 366 aaKnown RBP12.29□□□□□ -0.44
HPS1-208ENST00000467246 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 Q3C1V9 767 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 AADACL2Q6P093 401 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 CPNE8Q86YQ8 564 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 KRT35Q92764 455 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 BTBD6Q96KE9 485 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 RNPC3Q96LT9 517 aaKnown RBP12.29□□□□□ -0.44
HPS1-208ENST00000467246 FNBP1Q96RU3 617 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 FHDC1Q9C0D6 1143 aaPredicted RBP12.29□□□□□ -0.44
HPS1-208ENST00000467246 GRIN3BO60391 1043 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 COPB2P35606 906 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 MARCKSL1P49006 195 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 CLDN10P78369 228 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 PSMD6Q15008 389 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 SEZ6Q53EL9 994 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 TDRD10Q5VZ19 366 aaKnown RBP12.29□□□□□ -0.44
HPS1-208ENST00000467246 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 ERO1BQ86YB8 467 aa12.29□□□□□ -0.44
HPS1-208ENST00000467246 CELF4Q9BZC1 486 aaKnown RBP12.29□□□□□ -0.44
HPS1-208ENST00000467246 SBF1O95248 1867 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 TTLL13PA6NNM8 815 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 CCDC188H7C350 402 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 MYO1CO00159 1063 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 C4BPAP04003 597 aaKnown RBP12.28□□□□□ -0.44
HPS1-208ENST00000467246 MARK3P27448 753 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 CAPSQ13938 189 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 NEDD9Q14511 834 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 TCEAL1Q15170 157 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 ZACNQ401N2 412 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 TRIM50Q86XT4 487 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 CARD9Q9H257 536 aa12.28□□□□□ -0.44
HPS1-208ENST00000467246 TAF1DQ9H5J8 278 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms