RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CHST12Q9NRB3 414 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 MOCS1Q9NZB8 636 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 NR2E3Q9Y5X4 410 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 SLC4A7Q9Y6M7 1214 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 A0A1B0GTL3 188 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 TPD52L2O43399 206 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 AMY1AP04745 511 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 IFIT2P09913 472 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 MYBP10242 640 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 RPL17P18621 184 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 DDCP20711 480 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 SMARCA1P28370 1054 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 GJA9P57773 515 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 ZNF280AP59817 542 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 CTXN1P60606 82 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 ATP8B2P98198 1209 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 SP140Q13342 867 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 PKN1Q16512 942 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 TBR1Q16650 682 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 FAM47AQ5JRC9 791 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 IL31Q6EBC2 164 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 OGFOD2Q6N063 350 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 GADL1Q6ZQY3 521 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 IFI44Q8TCB0 444 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 CDC5LQ99459 802 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 PDCD2LQ9BRP1 358 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 NUP62CLQ9H1M0 184 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 WDCPQ9H6R7 721 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 LMBRD1Q9NUN5 540 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 PNPOQ9NVS9 261 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 PUF60Q9UHX1 559 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 NR2E1Q9Y466 385 aa5.49□□□□□ -1.53
CDC42BPA-211ENST00000466538 PLEKHD1A6NEE1 506 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 NPIPB6E9PJ23 425 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 H3BUI4 141 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 FRS3O43559 492 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 MGEA5O60502 916 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 B4GALT4O60513 344 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 GPR32O75388 356 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 TYRP14679 529 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 SYN1P17600 705 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 MALP21145 153 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 PTPN7P35236 360 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 SLURP1P55000 103 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 NPEPPSP55786 919 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 ADAM8P78325 824 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 APBA1Q02410 837 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 TLE1Q04724 770 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 MORC3Q14149 939 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 CNN3Q15417 329 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 ATP2B3Q16720 1220 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 LONRF3Q496Y0 759 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 BORAQ6PGQ7 559 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 GPR155Q7Z3F1 870 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 ZNF572Q7Z3I7 529 aaPredicted RBP5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 HEATR3Q7Z4Q2 680 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 PLEKHH3Q7Z736 793 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 TRMT2AQ8IZ69 625 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 ADGRG2Q8IZP9 1017 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 KRT78Q8N1N4 520 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 OR5M3Q8NGP4 307 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 TMX3Q96JJ7 454 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 STRBPQ96SI9 672 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 ENKD1Q9H0I2 346 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 SIDT1Q9NXL6 827 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 FAM50BQ9Y247 325 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 PCDHA3Q9Y5H8 950 aa5.48□□□□□ -1.53
CDC42BPA-211ENST00000466538 ATRNL1Q5VV63 1379 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 PMM2O15305 246 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 PHGDHO43175 533 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 SLC26A4O43511 780 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 NUAK1O60285 661 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 SASH1O94885 1247 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 HTR3AP46098 478 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 KCNC1P48547 511 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 FLT3LGP49771 235 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 GZMKP49863 264 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 NEK3P51956 506 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 AK2P54819 239 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 RAC3P60763 192 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 RAB1AP62820 205 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 PTH1RQ03431 593 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 SNAPC2Q13487 334 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 MTM1Q13496 603 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 POLD3Q15054 466 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 SURF1Q15526 300 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 RNF151Q2KHN1 245 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 ZNF648Q5T619 568 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 CIAPIN1Q6FI81 312 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 OTUD7BQ6GQQ9 843 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 OR14K1Q8NGZ2 314 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 LRTOMTQ8WZ04 291 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 SLC35A4Q96G79 324 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 BORCS6Q96GS4 357 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 TNIP3Q96KP6 325 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 RPL10LQ96L21 214 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 FMNL2Q96PY5 1086 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 GPHA2Q96T91 129 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 MPHOSPH6Q99547 160 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 VRK1Q99986 396 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms