RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CACNG4Q9UBN1 327 aa21.16■□□□□ 0.98
COL9A3-206ENST00000466532 TADA2AO75478 443 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 SPATA31D3P0C874 917 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 FXR2P51116 673 aaKnown RBP eCLIP21.15■□□□□ 0.98
COL9A3-206ENST00000466532 TUSC3Q13454 348 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 HSP90AA2PQ14568 343 aaPredicted RBP21.15■□□□□ 0.98
COL9A3-206ENST00000466532 NBR1Q14596 966 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 PPP2R5AQ15172 486 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 ECM1Q16610 540 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 SPATA31D4Q6ZUB0 917 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 GLYCTKQ8IVS8 523 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 RIN2Q8WYP3 895 aaPredicted RBP21.15■□□□□ 0.98
COL9A3-206ENST00000466532 PAAF1Q9BRP4 392 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 ADPGKQ9BRR6 497 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 CCDC113Q9H0I3 377 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 USP20Q9Y2K6 914 aa21.15■□□□□ 0.98
COL9A3-206ENST00000466532 SF3B1O75533 1304 aaKnown RBP eCLIP21.14■□□□□ 0.97
COL9A3-206ENST00000466532 CASTOR2A6NHX0 329 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 ACKR2O00590 384 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 RFPL2O75678 378 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 CYP26C1Q6V0L0 522 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 GPR65Q8IYL9 337 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 C4orf32Q8N8J7 132 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 HDAC7Q8WUI4 952 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 IFT74Q96LB3 600 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 KIF2CQ99661 725 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 BHMT2Q9H2M3 363 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 POLD4Q9HCU8 107 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 FNIP2Q9P278 1114 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 LRWD1Q9UFC0 647 aa21.14■□□□□ 0.97
COL9A3-206ENST00000466532 PTGESO14684 152 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 TGM5O43548 720 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 RECQL4O94761 1208 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 EDN1P05305 212 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 RPL17P18621 184 aaKnown RBP21.13■□□□□ 0.97
COL9A3-206ENST00000466532 CREMQ03060 361 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 HASPINQ8TF76 798 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 SMG7Q92540 1137 aaKnown RBP21.13■□□□□ 0.97
COL9A3-206ENST00000466532 KIFC3Q9BVG8 833 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 RHOBTB2Q9BYZ6 727 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 PLEKHA4Q9H4M7 779 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 WDR6Q9NNW5 1121 aaKnown RBP21.13■□□□□ 0.97
COL9A3-206ENST00000466532 KIAA1024Q9UPX6 916 aa21.13■□□□□ 0.97
COL9A3-206ENST00000466532 PDCD11Q14690 1871 aaKnown RBP21.13■□□□□ 0.97
COL9A3-206ENST00000466532 CLUHO75153 1309 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 C1RP00736 705 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 THP07101 528 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 GBP2P32456 591 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-206ENST00000466532 TDGQ13569 410 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 EEF1DP3Q658K8 133 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 PRSS55Q6UWB4 352 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-206ENST00000466532 STAMQ92783 540 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 KIFAP3Q92845 792 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 CXCL16Q9H2A7 254 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 MFSD1Q9H3U5 465 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 KCNK12Q9HB15 430 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 PIDD1Q9HB75 910 aa21.12■□□□□ 0.97
COL9A3-206ENST00000466532 DDX19AQ9NUU7 478 aaKnown RBP21.12■□□□□ 0.97
COL9A3-206ENST00000466532 N4BP1O75113 896 aaKnown RBP21.11■□□□□ 0.97
COL9A3-206ENST00000466532 KIF4AO95239 1232 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 U2AF2P26368 475 aaKnown RBP eCLIP21.11■□□□□ 0.97
COL9A3-206ENST00000466532 EFNA5P52803 228 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 NUBP1P53384 320 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 PTGDRQ13258 359 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 PDIA5Q14554 519 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 DCAF4L1Q3SXM0 396 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 RTP2Q5QGT7 225 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 TMEM105Q8N8V8 129 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 SNX29Q8TEQ0 813 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 ZNF707Q96C28 371 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-206ENST00000466532 RAB34Q9BZG1 259 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 NT5C3AQ9H0P0 336 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 IRF2BPLQ9H1B7 796 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 FAM86C1Q9NVL1 165 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 GDAQ9Y2T3 454 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 PCDHB6Q9Y5E3 794 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 STK24Q9Y6E0 443 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 MYH15Q9Y2K3 1946 aa21.11■□□□□ 0.97
COL9A3-206ENST00000466532 TOB1P50616 345 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-206ENST00000466532 NAB2Q15742 525 aa21.1■□□□□ 0.97
COL9A3-206ENST00000466532 FAM171A1Q5VUB5 890 aa21.1■□□□□ 0.97
COL9A3-206ENST00000466532 ASTLQ6HA08 431 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-206ENST00000466532 LILRA6Q6PI73 481 aa21.1■□□□□ 0.97
COL9A3-206ENST00000466532 CEP57Q86XR8 500 aa21.1■□□□□ 0.97
COL9A3-206ENST00000466532 IGSF22Q8N9C0 903 aa21.1■□□□□ 0.97
COL9A3-206ENST00000466532 ATOH1Q92858 354 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-206ENST00000466532 TTPALQ9BTX7 342 aa21.1■□□□□ 0.97
COL9A3-206ENST00000466532 ZDHHC7Q9NXF8 308 aa21.1■□□□□ 0.97
COL9A3-206ENST00000466532 IGSF9Q9P2J2 1179 aa21.1■□□□□ 0.97
COL9A3-206ENST00000466532 DUSP12Q9UNI6 340 aa21.1■□□□□ 0.97
COL9A3-206ENST00000466532 H0Y858 1186 aa21.09■□□□□ 0.97
COL9A3-206ENST00000466532 GALR2O43603 387 aaPredicted RBP21.09■□□□□ 0.97
COL9A3-206ENST00000466532 PAPLNO95428 1278 aa21.09■□□□□ 0.97
COL9A3-206ENST00000466532 C8orf34Q49A92 452 aa21.09■□□□□ 0.97
COL9A3-206ENST00000466532 NT5DC1Q5TFE4 455 aa21.09■□□□□ 0.97
COL9A3-206ENST00000466532 ATF7IP2Q5U623 682 aa21.09■□□□□ 0.97
COL9A3-206ENST00000466532 PRKD2Q9BZL6 878 aa21.09■□□□□ 0.97
COL9A3-206ENST00000466532 E9PMD0 336 aa21.08■□□□□ 0.97
COL9A3-206ENST00000466532 K7ERI5 159 aa21.08■□□□□ 0.97
COL9A3-206ENST00000466532 PSMD5Q16401 504 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms