RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 PRSS55Q6UWB4 352 aaPredicted RBP16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 DISC1Q9NRI5 854 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 HCFC1R1Q9NWW0 138 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 SUCLA2Q9P2R7 463 aaPredicted RBP16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 DNMT3BQ9UBC3 853 aaKnown RBP16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 ADAM28Q9UKQ2 775 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 MRPS23Q9Y3D9 190 aaKnown RBP16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 ITPR1Q14643 2758 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 MLH1P40692 756 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 MTERF2Q49AM1 385 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 RTP2Q5QGT7 225 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 NFXL1Q6ZNB6 911 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 KSR1Q8IVT5 923 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 SMG8Q8ND04 991 aaKnown RBP16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 SLC7A14Q8TBB6 771 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 MCRS1Q96EZ8 462 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 CEP89Q96ST8 783 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 GAD1Q99259 594 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 CLSTN3Q9BQT9 956 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 MTA3Q9BTC8 594 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 NIFKQ9BYG3 293 aaKnown RBP16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 TRPV5Q9NQA5 729 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 SEPT9Q9UHD8 586 aaPredicted RBP16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 PIAS3Q9Y6X2 628 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 AKAP13Q12802 2813 aa16.47■□□□□ 0.23
HMGXB4-206ENST00000466438 CCDC69A6NI79 296 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 HOXA6P31267 233 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 HOXA11P31270 313 aaPredicted RBP16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 SCNN1GP51170 649 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 PTGDRQ13258 359 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 GRM2Q14416 872 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 PLA2G2CQ5R387 149 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 RNF43Q68DV7 783 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 CASC1Q6TDU7 716 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 WDR5BQ86VZ2 330 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 TMTC2Q8N394 836 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 IRF7Q92985 503 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 TRMT61BQ9BVS5 477 aaKnown RBP16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 BACH2Q9BYV9 841 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 MIOSQ9NXC5 875 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 PCDHGA5Q9Y5G8 931 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 TDRD15B5MCY1 1934 aaKnown RBP16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 SMG1Q96Q15 3661 aaKnown RBP16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 LAMA1P25391 3075 aa16.46■□□□□ 0.23
HMGXB4-206ENST00000466438 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 SMCO2A6NFE2 343 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 GIPC1O14908 333 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 FCARP24071 287 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 RAP1GAPP47736 663 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 RBM25P49756 843 aaKnown RBP16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 LRRC32Q14392 662 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 UVSSAQ2YD98 709 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 C8orf34Q49A92 452 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 PIK3R5Q8WYR1 880 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 KIF12Q96FN5 646 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 ZFP42Q96MM3 310 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 SCNM1Q9BWG6 230 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 ZNF334Q9HCZ1 680 aaPredicted RBP16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 IPPQ9Y573 584 aa16.45■□□□□ 0.22
HMGXB4-206ENST00000466438 hCG_1984214I3L0E3 225 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 TOP3BO95985 862 aaKnown RBP16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 GSPT1P15170 499 aaKnown RBP16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 SFNP31947 248 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 PSMD5Q16401 504 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 SLC5A9Q2M3M2 681 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 PRR16Q569H4 304 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 XKR3Q5GH77 459 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 AXDND1Q5T1B0 1012 aaPredicted RBP16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 JAKMIP3Q5VZ66 844 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 RTL10Q7L3V2 364 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 MAP4K3Q8IVH8 894 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 ZNF713Q8N859 430 aaPredicted RBP16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 ZFP14Q9HCL3 533 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 AVENQ9NQS1 362 aaPredicted RBP16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 LOC400499M0QZD8 3231 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 CNTNAP5Q8WYK1 1306 aa16.44■□□□□ 0.22
HMGXB4-206ENST00000466438 SDK1Q7Z5N4 2213 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 TICRRQ7Z2Z1 1910 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 TMEM150BA6NC51 233 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 SH2B2O14492 632 aaPredicted RBP16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 CDC45O75419 566 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 MAFO75444 373 aaPredicted RBP16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 TADA2AO75478 443 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 RHOP08100 348 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 CEBPBP17676 345 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 JAK3P52333 1124 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 SOWAHCQ53LP3 525 aaPredicted RBP16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 POTEHQ6S545 545 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 SRGAP1Q7Z6B7 1085 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 FANCBQ8NB91 859 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 LNX1Q8TBB1 728 aaPredicted RBP16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 GAB3Q8WWW8 586 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 JPH2Q9BR39 696 aaPredicted RBP16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 SH2D3AQ9BRG2 576 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 TTPALQ9BTX7 342 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms