RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 ATP2C1P98194 919 aaPredicted RBP9.52□□□□□ -0.89
DDR1-242ENST00000465966 CREMQ03060 361 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 GRIN1Q05586 938 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 NCBP1Q09161 790 aaKnown RBP9.52□□□□□ -0.89
DDR1-242ENST00000465966 ZNF174Q15697 407 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 ZNF528Q3MIS6 628 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.89
DDR1-242ENST00000465966 KIAA0319Q5VV43 1072 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 ADALQ6DHV7 355 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 SHC4Q6S5L8 630 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 GET4Q7L5D6 327 aaPredicted RBP9.52□□□□□ -0.89
DDR1-242ENST00000465966 SRGAP1Q7Z6B7 1085 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 FSIP1Q8NA03 581 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 SLC7A3Q8WY07 619 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 SLC5A5Q92911 643 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 LENG9Q96B70 501 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 CNTNAP3BQ96NU0 1288 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 COLEC11Q9BWP8 271 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 CNTNAP3Q9BZ76 1288 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 PRKD2Q9BZL6 878 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 NT5C3AQ9H0P0 336 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 UNC45AQ9H3U1 944 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 RXFP1Q9HBX9 757 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.52□□□□□ -0.89
DDR1-242ENST00000465966 SPATA6Q9NWH7 488 aaPredicted RBP9.52□□□□□ -0.89
DDR1-242ENST00000465966 NUMBLQ9Y6R0 609 aa9.52□□□□□ -0.89
DDR1-242ENST00000465966 KANSL1LA0AUZ9 987 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 PRR5-ARHGAP8B1AHC4 643 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 EDIL3O43854 480 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 B4GALT3O60512 393 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 DKC1O60832 514 aaKnown RBP eCLIP9.51□□□□□ -0.89
DDR1-242ENST00000465966 CUTAO60888 179 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 BMP15O95972 392 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 SPATA31D3P0C874 917 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 ITGA4P13612 1032 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 MCM7P33993 719 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 PSMC5P62195 406 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 ARHGAP8P85298 464 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 DSG1Q02413 1049 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 HTR4Q13639 388 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 CCDC183Q5T5S1 534 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 RESP18Q5W5W9 173 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 SPATA31D4Q6ZUB0 917 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 MTSS1LQ765P7 747 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 TAS1R1Q7RTX1 841 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 NEK8Q86SG6 692 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 PALB2Q86YC2 1186 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 KSR1Q8IVT5 923 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 COLGALT2Q8IYK4 626 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 HACE1Q8IYU2 909 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
DDR1-242ENST00000465966 SUMF1Q8NBK3 374 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 ENGASEQ8NFI3 743 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 TBCKQ8TEA7 893 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 CLIC6Q96NY7 704 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 CEP89Q96ST8 783 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 SH2D3AQ9BRG2 576 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 FOXQ1Q9C009 403 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 IFT122Q9HBG6 1241 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 DDX19AQ9NUU7 478 aaKnown RBP9.51□□□□□ -0.89
DDR1-242ENST00000465966 FBXO4Q9UKT5 387 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 CDV3Q9UKY7 258 aaKnown RBP9.51□□□□□ -0.89
DDR1-242ENST00000465966 PCDHGA2Q9Y5H1 932 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 COL4A3BPQ9Y5P4 624 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 GVINP1Q7Z2Y8 2422 aa9.51□□□□□ -0.89
DDR1-242ENST00000465966 FAM237AA0A1B0GTK4 181 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 A0A1B0GVL5 298 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 TMEM150BA6NC51 233 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 NCAM2O15394 837 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 TGM5O43548 720 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 PSMD10O75832 226 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 ERLIN2O94905 339 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 PAPLNO95428 1278 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 SRGAP2CP0DJJ0 459 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 PFKFB1P16118 471 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 FSHRP23945 695 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 AXLP30530 894 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 MAGEA9P43362 315 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 AFF1P51825 1210 aaKnown RBP9.5□□□□□ -0.89
DDR1-242ENST00000465966 NDUFA8P51970 172 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 GPC5P78333 572 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 PFKPQ01813 784 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 LMNB2Q03252 620 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 PRKCQQ04759 706 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 CSTF1Q05048 431 aaKnown RBP9.5□□□□□ -0.89
DDR1-242ENST00000465966 FAM160A1Q05DH4 1040 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 PTGDRQ13258 359 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 SNW1Q13573 536 aaKnown RBP9.5□□□□□ -0.89
DDR1-242ENST00000465966 UBXN2BQ14CS0 331 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.89
DDR1-242ENST00000465966 USP41Q3LFD5 358 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 Q4G0T1 1027 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 CCDC73Q6ZRK6 1079 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 GPR65Q8IYL9 337 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 C4orf32Q8N8J7 132 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 PSPC1Q8WXF1 523 aaKnown RBP9.5□□□□□ -0.89
DDR1-242ENST00000465966 SYAP1Q96A49 352 aaPredicted RBP9.5□□□□□ -0.89
DDR1-242ENST00000465966 ZNF707Q96C28 371 aaPredicted RBP9.5□□□□□ -0.89
DDR1-242ENST00000465966 OSBPL6Q9BZF3 934 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 TMEM60Q9H2L4 133 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms