RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 C1QTNF1Q9BXJ1 281 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 GPR62Q9BZJ7 368 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 CDT1Q9H211 546 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 PTPRHQ9HD43 1115 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 CASTOR2A6NHX0 329 aa23.94■■□□□ 1.42
LIME1-203ENST00000465591 LOC730098B7Z3J9 87 aa23.94■■□□□ 1.42
LIME1-203ENST00000465591 ABLIM1O14639 778 aa23.94■■□□□ 1.42
LIME1-203ENST00000465591 PLS3P13797 630 aa23.94■■□□□ 1.42
LIME1-203ENST00000465591 HOXB8P17481 243 aaPredicted RBP23.94■■□□□ 1.42
LIME1-203ENST00000465591 PLCG1P19174 1290 aa23.94■■□□□ 1.42
LIME1-203ENST00000465591 LONP1P36776 959 aaKnown RBP23.94■■□□□ 1.42
LIME1-203ENST00000465591 UBA7P41226 1012 aa23.94■■□□□ 1.42
LIME1-203ENST00000465591 CBX2Q14781 532 aaPredicted RBP23.94■■□□□ 1.42
LIME1-203ENST00000465591 NTPCRQ9BSD7 190 aaKnown RBP23.94■■□□□ 1.42
LIME1-203ENST00000465591 COLEC11Q9BWP8 271 aa23.94■■□□□ 1.42
LIME1-203ENST00000465591 PHF7Q9BWX1 381 aaPredicted RBP23.94■■□□□ 1.42
LIME1-203ENST00000465591 C17orf75Q9HAS0 396 aa23.94■■□□□ 1.42
LIME1-203ENST00000465591 CITO14578 2027 aa23.94■■□□□ 1.42
LIME1-203ENST00000465591 VWA8A3KMH1 1905 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 MYH15Q9Y2K3 1946 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 SLC26A4O43511 780 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 WEE2P0C1S8 567 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 MARCKSP29966 332 aaPredicted RBP23.93■■□□□ 1.42
LIME1-203ENST00000465591 TUSC3Q13454 348 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 SPECC1Q5M775 1068 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 KIAA0319Q5VV43 1072 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 FUT10Q6P4F1 479 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 RNF135Q8IUD6 432 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 TMEM87AQ8NBN3 555 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 TMEM161BQ8NDZ6 487 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 SPIRE2Q8WWL2 714 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 CALML4Q96GE6 196 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 MRPL4Q9BYD3 311 aaKnown RBP23.93■■□□□ 1.42
LIME1-203ENST00000465591 MRPL17Q9NRX2 175 aaKnown RBP23.93■■□□□ 1.42
LIME1-203ENST00000465591 STK39Q9UEW8 545 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 RAPGEFL1Q9UHV5 662 aa23.93■■□□□ 1.42
LIME1-203ENST00000465591 FBXO2Q9UK22 296 aaPredicted RBP23.93■■□□□ 1.42
LIME1-203ENST00000465591 RBM19Q9Y4C8 960 aaKnown RBP23.93■■□□□ 1.42
LIME1-203ENST00000465591 C2orf16Q68DN1 1984 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 NR1I2O75469 434 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 URODP06132 367 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 PROZP22891 400 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 IGFBP6P24592 240 aaPredicted RBP23.92■■□□□ 1.42
LIME1-203ENST00000465591 GLUD2P49448 558 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 CLCN4P51793 760 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 DHX8Q14562 1220 aaKnown RBP23.92■■□□□ 1.42
LIME1-203ENST00000465591 MCM6Q14566 821 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 GLRA4Q5JXX5 417 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 RARS2Q5T160 578 aaKnown RBP23.92■■□□□ 1.42
LIME1-203ENST00000465591 GPBP1Q86WP2 473 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 HASPINQ8TF76 798 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 EPSTI1Q96J88 318 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 ZBTB45Q96K62 511 aaPredicted RBP23.92■■□□□ 1.42
LIME1-203ENST00000465591 RPGRIP1Q96KN7 1286 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 REEP2Q9BRK0 252 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 LRFN3Q9BTN0 628 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 ADAM7Q9H2U9 754 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 CHST7Q9NS84 486 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 KCND2Q9NZV8 630 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 MUTYHQ9UIF7 546 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 ADAM28Q9UKQ2 775 aa23.92■■□□□ 1.42
LIME1-203ENST00000465591 DCXO43602 365 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 KIF4AO95239 1232 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 THP07101 528 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 MAPTP10636 758 aaKnown RBP23.91■■□□□ 1.42
LIME1-203ENST00000465591 KLRC2P26717 231 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 DSG1Q02413 1049 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 CEBPZQ03701 1054 aaKnown RBP23.91■■□□□ 1.42
LIME1-203ENST00000465591 HSP90AA2PQ14568 343 aaPredicted RBP23.91■■□□□ 1.42
LIME1-203ENST00000465591 ZNF568Q3ZCX4 644 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 TPRNQ4KMQ1 711 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 ZBTB33Q86T24 672 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 SNX21Q969T3 373 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 EMILIN2Q9BXX0 1053 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 TECTAO75443 2155 aa23.91■■□□□ 1.42
LIME1-203ENST00000465591 TRIOO75962 3097 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 MYO10Q9HD67 2058 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 TEX28O15482 410 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 MEFVO15553 781 aaPredicted RBP23.9■■□□□ 1.42
LIME1-203ENST00000465591 GRM5P41594 1212 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 OSTNP61366 133 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 RAD54LQ92698 747 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 FBXL18Q96ME1 805 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 CLIC6Q96NY7 704 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 PPP1R10Q96QC0 940 aaKnown RBP23.9■■□□□ 1.42
LIME1-203ENST00000465591 USP28Q96RU2 1077 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 CCSER1Q9C0I3 900 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 POMKQ9H5K3 350 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 RXFP1Q9HBX9 757 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 DZANK1Q9NVP4 752 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 MTCL1Q9Y4B5 1905 aaKnown RBP23.9■■□□□ 1.42
LIME1-203ENST00000465591 PDCD11Q14690 1871 aaKnown RBP23.9■■□□□ 1.42
LIME1-203ENST00000465591 DENND4AQ7Z401 1863 aa23.9■■□□□ 1.42
LIME1-203ENST00000465591 STX6O43752 255 aa23.89■■□□□ 1.41
LIME1-203ENST00000465591 GPR37L1O60883 481 aa23.89■■□□□ 1.41
LIME1-203ENST00000465591 COL9A1P20849 921 aa23.89■■□□□ 1.41
LIME1-203ENST00000465591 SP100P23497 879 aaPredicted RBP23.89■■□□□ 1.41
LIME1-203ENST00000465591 TMEM31Q5JXX7 168 aa23.89■■□□□ 1.41
LIME1-203ENST00000465591 PPFIBP1Q86W92 1011 aa23.89■■□□□ 1.41
LIME1-203ENST00000465591 SRPRBQ9Y5M8 271 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms