RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 EDN1P05305 212 aa23.03■■□□□ 1.28
CSPG5-204ENST00000465441 TOB1P50616 345 aaPredicted RBP23.03■■□□□ 1.28
CSPG5-204ENST00000465441 TMEM132AQ24JP5 1023 aa23.03■■□□□ 1.28
CSPG5-204ENST00000465441 HAUS3Q68CZ6 603 aa23.03■■□□□ 1.28
CSPG5-204ENST00000465441 GPR65Q8IYL9 337 aa23.03■■□□□ 1.28
CSPG5-204ENST00000465441 RIN2Q8WYP3 895 aaPredicted RBP23.03■■□□□ 1.28
CSPG5-204ENST00000465441 BHMT2Q9H2M3 363 aa23.03■■□□□ 1.28
CSPG5-204ENST00000465441 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.03■■□□□ 1.28
CSPG5-204ENST00000465441 FNIP2Q9P278 1114 aa23.03■■□□□ 1.28
CSPG5-204ENST00000465441 KIAA1024Q9UPX6 916 aa23.03■■□□□ 1.28
CSPG5-204ENST00000465441 PTGESO14684 152 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 U2AF2P26368 475 aaKnown RBP eCLIP23.02■■□□□ 1.28
CSPG5-204ENST00000465441 TUSC3Q13454 348 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 PDIA5Q14554 519 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 HSP90AA2PQ14568 343 aaPredicted RBP23.02■■□□□ 1.28
CSPG5-204ENST00000465441 EEF1DP3Q658K8 133 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 LILRA6Q6PI73 481 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 CYP26C1Q6V0L0 522 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 GLYCTKQ8IVS8 523 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 HDAC7Q8WUI4 952 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 RHOBTB2Q9BYZ6 727 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 WDR6Q9NNW5 1121 aaKnown RBP23.02■■□□□ 1.28
CSPG5-204ENST00000465441 KMT2EQ8IZD2 1858 aa23.02■■□□□ 1.28
CSPG5-204ENST00000465441 PLXNA3P51805 1871 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 CASTOR2A6NHX0 329 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 TGM5O43548 720 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 RECQL4O94761 1208 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 C1RP00736 705 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 THP07101 528 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 RPL17P18621 184 aaKnown RBP23.01■■□□□ 1.27
CSPG5-204ENST00000465441 PTGDRQ13258 359 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 PPP2R5AQ15172 486 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 ELMSAN1Q6PJG2 1045 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 IFT74Q96LB3 600 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 ADPGKQ9BRR6 497 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 KIFC3Q9BVG8 833 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 PLEKHA4Q9H4M7 779 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 KCNK12Q9HB15 430 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 PCDHB6Q9Y5E3 794 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 C2orf16Q68DN1 1984 aa23.01■■□□□ 1.27
CSPG5-204ENST00000465441 DENND4AQ7Z401 1863 aa23■■□□□ 1.27
CSPG5-204ENST00000465441 ZDBF2Q9HCK1 2354 aa23■■□□□ 1.27
CSPG5-204ENST00000465441 N4BP1O75113 896 aaKnown RBP23■■□□□ 1.27
CSPG5-204ENST00000465441 TDGQ13569 410 aa23■■□□□ 1.27
CSPG5-204ENST00000465441 NAB2Q15742 525 aa23■■□□□ 1.27
CSPG5-204ENST00000465441 C8orf34Q49A92 452 aa23■■□□□ 1.27
CSPG5-204ENST00000465441 RTP2Q5QGT7 225 aa23■■□□□ 1.27
CSPG5-204ENST00000465441 NT5DC1Q5TFE4 455 aa23■■□□□ 1.27
CSPG5-204ENST00000465441 PRSS55Q6UWB4 352 aaPredicted RBP23■■□□□ 1.27
CSPG5-204ENST00000465441 HASPINQ8TF76 798 aa23■■□□□ 1.27
CSPG5-204ENST00000465441 SMG7Q92540 1137 aaKnown RBP23■■□□□ 1.27
CSPG5-204ENST00000465441 ZNF707Q96C28 371 aaPredicted RBP23■■□□□ 1.27
CSPG5-204ENST00000465441 NT5C3AQ9H0P0 336 aa23■■□□□ 1.27
CSPG5-204ENST00000465441 DDX19AQ9NUU7 478 aaKnown RBP23■■□□□ 1.27
CSPG5-204ENST00000465441 PAPLNO95428 1278 aa22.99■■□□□ 1.27
CSPG5-204ENST00000465441 TMEM105Q8N8V8 129 aa22.99■■□□□ 1.27
CSPG5-204ENST00000465441 IGSF22Q8N9C0 903 aa22.99■■□□□ 1.27
CSPG5-204ENST00000465441 SNX29Q8TEQ0 813 aa22.99■■□□□ 1.27
CSPG5-204ENST00000465441 KIFAP3Q92845 792 aa22.99■■□□□ 1.27
CSPG5-204ENST00000465441 GDAQ9Y2T3 454 aa22.99■■□□□ 1.27
CSPG5-204ENST00000465441 STK24Q9Y6E0 443 aa22.99■■□□□ 1.27
CSPG5-204ENST00000465441 E9PMD0 336 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 KIF4AO95239 1232 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 CENPBP07199 599 aaPredicted RBP22.98■■□□□ 1.27
CSPG5-204ENST00000465441 GBP2P32456 591 aaPredicted RBP22.98■■□□□ 1.27
CSPG5-204ENST00000465441 EFNA5P52803 228 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 NUBP1P53384 320 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 IL17AQ16552 155 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 FAM171A1Q5VUB5 890 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 CEP57Q86XR8 500 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 LNX1Q8TBB1 728 aaPredicted RBP22.98■■□□□ 1.27
CSPG5-204ENST00000465441 STAMQ92783 540 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 CLSTN3Q9BQT9 956 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 PIDD1Q9HB75 910 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 IGSF9Q9P2J2 1179 aa22.98■■□□□ 1.27
CSPG5-204ENST00000465441 SF3B1O75533 1304 aaKnown RBP eCLIP22.98■■□□□ 1.27
CSPG5-204ENST00000465441 MTCL1Q9Y4B5 1905 aaKnown RBP22.98■■□□□ 1.27
CSPG5-204ENST00000465441 H0Y858 1186 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 K7ERI5 159 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 ATF7IP2Q5U623 682 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 MYADMQ96S97 322 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 TTPALQ9BTX7 342 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 RAB34Q9BZG1 259 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 PRKD2Q9BZL6 878 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 IRF2BPLQ9H1B7 796 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 MFSD1Q9H3U5 465 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 FAM86C1Q9NVL1 165 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 ZDHHC7Q9NXF8 308 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 DUSP12Q9UNI6 340 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 DNM3Q9UQ16 869 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 CLUHO75153 1309 aa22.97■■□□□ 1.27
CSPG5-204ENST00000465441 PP2D1A8MPX8 630 aa22.96■■□□□ 1.27
CSPG5-204ENST00000465441 IGFBP6P24592 240 aaPredicted RBP22.96■■□□□ 1.27
CSPG5-204ENST00000465441 CDC25AP30304 524 aa22.96■■□□□ 1.27
CSPG5-204ENST00000465441 CREMQ03060 361 aa22.96■■□□□ 1.27
CSPG5-204ENST00000465441 DCAF4L1Q3SXM0 396 aa22.96■■□□□ 1.27
CSPG5-204ENST00000465441 ASTLQ6HA08 431 aaPredicted RBP22.96■■□□□ 1.27
CSPG5-204ENST00000465441 RSAD2Q8WXG1 361 aa22.96■■□□□ 1.27
CSPG5-204ENST00000465441 PIK3R5Q8WYR1 880 aa22.96■■□□□ 1.27
CSPG5-204ENST00000465441 ATOH1Q92858 354 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms