RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 DDX43Q9NXZ2 648 aaKnown RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 EURLQ9NYK6 297 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 ARMCX3Q9UH62 379 aaPredicted RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 LGALS13Q9UHV8 139 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 PCDHGA4Q9Y5G9 962 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 SLC4A7Q9Y6M7 1214 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 MAGEA13PA6NCF6 341 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 H0Y3Z8 333 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 TMEM253P0C7T8 217 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 PLCG2P16885 1265 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 EPHA7Q15375 998 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 CTC1Q2NKJ3 1217 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 KRT25Q7Z3Z0 450 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 NEK8Q86SG6 692 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 CCNJLQ8IV13 435 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 CYP4X1Q8N118 509 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 SLC16A10Q8TF71 515 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 RFFLQ8WZ73 363 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 DYNLL2Q96FJ2 89 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 MIPEPQ99797 713 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 DHX36Q9H2U1 1008 aaKnown RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 CDC42EP4Q9H3Q1 356 aaKnown RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 DNAAF2Q9NVR5 837 aaKnown RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 PDP2Q9P2J9 529 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 ATXN10Q9UBB4 475 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 STOML1Q9UBI4 398 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 BIN2Q9UBW5 565 aaPredicted RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 IGKV6D-41A0A0C4DH26 115 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 USP17L3A6NCW0 530 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 USP17L4A6NCW7 530 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 PALM3A6NDB9 673 aaPredicted RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 GFPT2O94808 682 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 TTLL1O95922 423 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 KCNA3P22001 575 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 ATP2B4P23634 1241 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 ZNF211Q13398 564 aaPredicted RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 RCN2Q14257 317 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 NONOQ15233 471 aaKnown RBP eCLIP6.92□□□□□ -1.3
SIK3-207ENST00000465421 CNPY1Q3B7I2 92 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 SNX30Q5VWJ9 437 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 RFWD3Q6PCD5 774 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 RHBDF2Q6PJF5 856 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 RGS9BPQ6ZS82 235 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 C16orf86Q6ZW13 317 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 USP17L1Q7RTZ2 530 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 ANKRD42Q8N9B4 389 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 SCFD1Q8WVM8 642 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 SCG3Q8WXD2 468 aaKnown RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 OPTNQ96CV9 577 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 SPZ1Q9BXG8 430 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 CYLDQ9NQC7 956 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 STK32BQ9NY57 414 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 TFCP2L1Q9NZI6 479 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 G3BP2Q9UN86 482 aaKnown RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 COG5Q9UP83 839 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 BCS1LQ9Y276 419 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 USH1CQ9Y6N9 552 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 TMEM110-MUSTN1A8MSY1 372 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 CREB3O43889 395 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 CETPP11597 493 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 BRAFP15056 766 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 ABCB4P21439 1286 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 ATP5DP30049 168 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 WDR4P57081 412 aaKnown RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 NFIXQ14938 502 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 SIX1Q15475 284 aaPredicted RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 EDRF1Q3B7T1 1238 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 FAM182BQ5T319 152 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 SMIM5Q71RC9 77 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 INTS8Q75QN2 995 aaKnown RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 TXNRD3Q86VQ6 643 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 SLC44A5Q8NCS7 719 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 LRRC8CQ8TDW0 803 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 C10orf82Q8WW14 230 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 LRRC37BQ96QE4 947 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 SPATA16Q9BXB7 569 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 PITPNM3Q9BZ71 974 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 LRRC27Q9C0I9 530 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 DNAJC17Q9NVM6 304 aaKnown RBP6.92□□□□□ -1.3
SIK3-207ENST00000465421 MCM9Q9NXL9 1143 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 HDAC9Q9UKV0 1011 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 ACTL7BQ9Y614 415 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 NUMBLQ9Y6R0 609 aa6.92□□□□□ -1.3
SIK3-207ENST00000465421 GOLGB1Q14789 3259 aaKnown RBP6.91□□□□□ -1.3
SIK3-207ENST00000465421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.91□□□□□ -1.3
SIK3-207ENST00000465421 POTEMA6NI47 508 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 hCG_1984214I3L0E3 225 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 SKIP12755 728 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 HSPA6P17066 643 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 MARK3P27448 753 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 PTPN4P29074 926 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 PRDX5P30044 214 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 STX2P32856 288 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 NAPAP54920 295 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 HADHBP55084 474 aaKnown RBP6.91□□□□□ -1.3
SIK3-207ENST00000465421 AP1B1Q10567 949 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 GSTA3Q16772 222 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 FAM26FQ5R3K3 315 aa6.91□□□□□ -1.3
SIK3-207ENST00000465421 GJC2Q5T442 439 aaPredicted RBP6.91□□□□□ -1.3
SIK3-207ENST00000465421 PRR5LQ6MZQ0 368 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms