RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 NR4A1P22736 598 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 CASRP41180 1078 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS8-217ENST00000465213 FAM214AQ32MH5 1076 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 CLEC4GQ6UXB4 293 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 ELOA2Q8IYF1 753 aaPredicted RBP5.52□□□□□ -1.53
VPS8-217ENST00000465213 GPR150Q8NGU9 434 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 TGFBRAP1Q8WUH2 860 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 ATXN2LQ8WWM7 1075 aaKnown RBP5.52□□□□□ -1.53
VPS8-217ENST00000465213 EVI5LQ96CN4 794 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 PKNOX2Q96KN3 472 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 RPS6KC1Q96S38 1066 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 ORAI2Q96SN7 254 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 HS3ST4Q9Y661 456 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 COMMD10Q9Y6G5 202 aa5.52□□□□□ -1.53
VPS8-217ENST00000465213 GRID2IPA4D2P6 1211 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 NRP1O14786 923 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 HOXA3O43365 443 aaPredicted RBP5.51□□□□□ -1.53
VPS8-217ENST00000465213 MFAP3LO75121 409 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 LTA4HP09960 611 aaKnown RBP5.51□□□□□ -1.53
VPS8-217ENST00000465213 MCCP23508 829 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 PAX3P23760 479 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 SCAND1P57086 179 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 DCAF17Q5H9S7 520 aaPredicted RBP5.51□□□□□ -1.53
VPS8-217ENST00000465213 CCSAPQ6IQ19 270 aaPredicted RBP5.51□□□□□ -1.53
VPS8-217ENST00000465213 ABHD15Q6UXT9 468 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 KRBA2Q6ZNG9 492 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 LRRC55Q6ZSA7 311 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 SYNE4Q8N205 404 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 COG1Q8WTW3 980 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 ARL8AQ96BM9 186 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 RAX2Q96IS3 184 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 MLST8Q9BVC4 326 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 C14orf119Q9NWQ9 140 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 DPP7Q9UHL4 492 aa5.51□□□□□ -1.53
VPS8-217ENST00000465213 CTSSP25774 331 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 WNT3AP56704 352 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 MEF2AQ02078 507 aaPredicted RBP5.5□□□□□ -1.53
VPS8-217ENST00000465213 FAPQ12884 760 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 MRPL49Q13405 166 aaKnown RBP5.5□□□□□ -1.53
VPS8-217ENST00000465213 C19orf54Q5BKX5 351 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 LY6G5CQ5SRR4 150 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 RNF219Q5W0B1 726 aaPredicted RBP5.5□□□□□ -1.53
VPS8-217ENST00000465213 KCNK18Q7Z418 384 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 SPATS2Q86XZ4 545 aaKnown RBP5.5□□□□□ -1.53
VPS8-217ENST00000465213 VRK3Q8IV63 474 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 OR5M3Q8NGP4 307 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 ATL2Q8NHH9 583 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 TSPEARQ8WU66 669 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 SNX33Q8WV41 574 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 AHCYL2Q96HN2 611 aaKnown RBP5.5□□□□□ -1.53
VPS8-217ENST00000465213 C8orf48Q96LL4 319 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 SENP7Q9BQF6 1050 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 G3BP2Q9UN86 482 aaKnown RBP5.5□□□□□ -1.53
VPS8-217ENST00000465213 PHLDB1Q86UU1 1377 aa5.5□□□□□ -1.53
VPS8-217ENST00000465213 PRAMEF4O60810 478 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 PDGFRBP09619 1106 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 ZEB1P37275 1124 aaPredicted RBP5.49□□□□□ -1.53
VPS8-217ENST00000465213 GPR3P46089 330 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 MRPS9P82933 396 aaKnown RBP5.49□□□□□ -1.53
VPS8-217ENST00000465213 CDK17Q00537 523 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 DUSP2Q05923 314 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 PTPAQ15257 358 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 WDR78Q5VTH9 848 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 DDX42Q86XP3 938 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS8-217ENST00000465213 FMNL3Q8IVF7 1028 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 LILRA3Q8N6C8 439 aaPredicted RBP5.49□□□□□ -1.53
VPS8-217ENST00000465213 PROKR1Q8TCW9 393 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 STAG1Q8WVM7 1258 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 ST8SIA2Q92186 375 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 ZNF764Q96H86 408 aaPredicted RBP5.49□□□□□ -1.53
VPS8-217ENST00000465213 QRSL1Q9H0R6 528 aaKnown RBP5.49□□□□□ -1.53
VPS8-217ENST00000465213 WDR26Q9H7D7 661 aa5.49□□□□□ -1.53
VPS8-217ENST00000465213 GNL3LQ9NVN8 582 aaKnown RBP5.49□□□□□ -1.53
VPS8-217ENST00000465213 K7ESF4 209 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 EXOC5O00471 708 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 ABHD16AO95870 558 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 NUDT3O95989 172 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 HSP90AA1P07900 732 aaKnown RBP5.48□□□□□ -1.53
VPS8-217ENST00000465213 IL12RB1P42701 662 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 GZMKP49863 264 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 ERVK-21P61565 698 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 MUM1Q2TAK8 710 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 MB21D1Q8N884 522 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 PRPF38AQ8NAV1 312 aaKnown RBP5.48□□□□□ -1.53
VPS8-217ENST00000465213 NTN5Q8WTR8 489 aaPredicted RBP5.48□□□□□ -1.53
VPS8-217ENST00000465213 JDP2Q8WYK2 163 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 PGBD4Q96DM1 585 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 IL17RAQ96F46 866 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 TOR3AQ9H497 397 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 PNMA2Q9UL42 364 aa5.48□□□□□ -1.53
VPS8-217ENST00000465213 COL4A3Q01955 1670 aa5.47□□□□□ -1.53
VPS8-217ENST00000465213 KIF3BO15066 747 aa5.47□□□□□ -1.53
VPS8-217ENST00000465213 TRIM24O15164 1050 aa5.47□□□□□ -1.53
VPS8-217ENST00000465213 WDHD1O75717 1129 aaPredicted RBP5.47□□□□□ -1.53
VPS8-217ENST00000465213 GYPEP15421 78 aa5.47□□□□□ -1.53
VPS8-217ENST00000465213 GNAT2P19087 354 aa5.47□□□□□ -1.53
VPS8-217ENST00000465213 CCT2P78371 535 aaKnown RBP5.47□□□□□ -1.53
VPS8-217ENST00000465213 SRSF2Q01130 221 aaKnown RBP5.47□□□□□ -1.53
VPS8-217ENST00000465213 FOXD4Q12950 439 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms