RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 C4orf32Q8N8J7 132 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 HASPINQ8TF76 798 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 KIFAP3Q92845 792 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 KIF2CQ99661 725 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 KIFC3Q9BVG8 833 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 PIDD1Q9HB75 910 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 RXFP1Q9HBX9 757 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.04■□□□□ 0.32
HOXB3-204ENST00000465120 CACNG4Q9UBN1 327 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 GDAQ9Y2T3 454 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 PCDHB6Q9Y5E3 794 aa17.04■□□□□ 0.32
HOXB3-204ENST00000465120 ZNF318Q5VUA4 2279 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 CCDC169A6NNP5 214 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 ST18O60284 1047 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 RECQL4O94761 1208 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 PDGFBP01127 241 aaPredicted RBP17.03■□□□□ 0.32
HOXB3-204ENST00000465120 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.322e-6■□□□□ 10.7
HOXB3-204ENST00000465120 AVPR2P30518 371 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 GBP2P32456 591 aaPredicted RBP17.03■□□□□ 0.32
HOXB3-204ENST00000465120 MRE11P49959 708 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 EFNA5P52803 228 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 PTPN5P54829 565 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 VCPP55072 806 aaKnown RBP17.03■□□□□ 0.32
HOXB3-204ENST00000465120 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
HOXB3-204ENST00000465120 C8orf34Q49A92 452 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 KRT79Q5XKE5 535 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 CEP57Q86XR8 500 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 RNF168Q8IYW5 571 aaPredicted RBP17.03■□□□□ 0.32
HOXB3-204ENST00000465120 PRSS33Q8NF86 280 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 MFSD1Q9H3U5 465 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 SMOC2Q9H3U7 446 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 DNM3Q9UQ16 869 aa17.03■□□□□ 0.32
HOXB3-204ENST00000465120 SF3B1O75533 1304 aaKnown RBP eCLIP17.02■□□□□ 0.328e-11■■■■■ 31.3
HOXB3-204ENST00000465120 E9PMD0 336 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 K7ERI5 159 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 RFPL2O75678 378 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 RPL17P18621 184 aaKnown RBP17.02■□□□□ 0.32
HOXB3-204ENST00000465120 TOB1P50616 345 aaPredicted RBP17.02■□□□□ 0.32
HOXB3-204ENST00000465120 CREMQ03060 361 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 RABEP1Q15276 862 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 EEF1DP3Q658K8 133 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 DTHD1Q6ZMT9 781 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 APBB1IPQ7Z5R6 666 aaPredicted RBP17.02■□□□□ 0.32
HOXB3-204ENST00000465120 CMASQ8NFW8 434 aaPredicted RBP17.02■□□□□ 0.32
HOXB3-204ENST00000465120 SMG7Q92540 1137 aaKnown RBP17.02■□□□□ 0.32
HOXB3-204ENST00000465120 STAMQ92783 540 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 PAAF1Q9BRP4 392 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 CCDC113Q9H0I3 377 aa17.02■□□□□ 0.32
HOXB3-204ENST00000465120 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.31
HOXB3-204ENST00000465120 PP2D1A8MPX8 630 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 TGM5O43548 720 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 EFEMP2O95967 443 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 PEX3P56589 373 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 DCAF4L1Q3SXM0 396 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 ATF7IP2Q5U623 682 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 FAM171A1Q5VUB5 890 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 PRSS55Q6UWB4 352 aaPredicted RBP17.01■□□□□ 0.31
HOXB3-204ENST00000465120 IGSF22Q8N9C0 903 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 PLEKHA4Q9H4M7 779 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 FNIP2Q9P278 1114 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 PLXNA3P51805 1871 aa17.01■□□□□ 0.31
HOXB3-204ENST00000465120 H3BQV1 296 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 LAD1O00515 517 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 PTGESO14684 152 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 KIF4AO95239 1232 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 EDN1P05305 212 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 CDC25AP30304 524 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 TDGQ13569 410 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 RTP2Q5QGT7 225 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 NT5DC1Q5TFE4 455 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 CYP26C1Q6V0L0 522 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 HDAC7Q8WUI4 952 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 TTPALQ9BTX7 342 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 CXCL16Q9H2A7 254 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
HOXB3-204ENST00000465120 ZDBF2Q9HCK1 2354 aa17■□□□□ 0.31
HOXB3-204ENST00000465120 C2orf16Q68DN1 1984 aa16.99■□□□□ 0.31
HOXB3-204ENST00000465120 HIP1RO75146 1068 aa16.99■□□□□ 0.31
HOXB3-204ENST00000465120 YARSP54577 528 aaKnown RBP16.99■□□□□ 0.31
HOXB3-204ENST00000465120 DMP1Q13316 513 aaPredicted RBP16.99■□□□□ 0.31
HOXB3-204ENST00000465120 GLRA4Q5JXX5 417 aa16.99■□□□□ 0.31
HOXB3-204ENST00000465120 GPR65Q8IYL9 337 aa16.99■□□□□ 0.31
HOXB3-204ENST00000465120 TCHPQ9BT92 498 aa16.99■□□□□ 0.31
HOXB3-204ENST00000465120 KCNK12Q9HB15 430 aa16.99■□□□□ 0.31
HOXB3-204ENST00000465120 WDR6Q9NNW5 1121 aaKnown RBP16.99■□□□□ 0.31
HOXB3-204ENST00000465120 KMT5AQ9NQR1 393 aa16.99■□□□□ 0.31
HOXB3-204ENST00000465120 FBXL21Q9UKT6 434 aa16.99■□□□□ 0.31
HOXB3-204ENST00000465120 CLUHO75153 1309 aa16.98■□□□□ 0.31
HOXB3-204ENST00000465120 PRPHP41219 470 aa16.98■□□□□ 0.31
HOXB3-204ENST00000465120 NPTX2P47972 431 aa16.98■□□□□ 0.31
HOXB3-204ENST00000465120 OSTNP61366 133 aa16.98■□□□□ 0.31
HOXB3-204ENST00000465120 TCF15Q12870 199 aa16.98■□□□□ 0.31
HOXB3-204ENST00000465120 ELAVL2Q12926 359 aaKnown RBP16.98■□□□□ 0.31
HOXB3-204ENST00000465120 PSMD5Q16401 504 aa16.98■□□□□ 0.31
HOXB3-204ENST00000465120 RILPL1Q5EBL4 403 aa16.98■□□□□ 0.31
HOXB3-204ENST00000465120 FLCNQ8NFG4 579 aa16.98■□□□□ 0.31
HOXB3-204ENST00000465120 ATOH1Q92858 354 aaPredicted RBP16.98■□□□□ 0.31
HOXB3-204ENST00000465120 DRC1Q96MC2 740 aa16.98■□□□□ 0.31
HOXB3-204ENST00000465120 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms