RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 UNC80Q8N2C7 3258 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.65■□□□□ 0.58
VPS52-215ENST00000464425 ABLIM1O14639 778 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 NRP1O14786 923 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 TOM1L1O75674 476 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 MCF2P10911 925 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 GAP43P17677 238 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 OR1G1P47890 313 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 NDUFA8P51970 172 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 GTF2BQ00403 316 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 TFF2Q03403 129 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 HERC4Q5GLZ8 1057 aaPredicted RBP18.65■□□□□ 0.58
VPS52-215ENST00000464425 ZPBP2Q6X784 338 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 EP400NLQ6ZTU2 488 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 ADGRD2Q7Z7M1 963 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 RBM23Q86U06 439 aaKnown RBP18.65■□□□□ 0.58
VPS52-215ENST00000464425 FSIP1Q8NA03 581 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 HLA-CQ95604 372 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 TCF25Q9BQ70 676 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 TNMDQ9H2S6 317 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 MRPL44Q9H9J2 332 aaKnown RBP18.65■□□□□ 0.58
VPS52-215ENST00000464425 MAGEF1Q9HAY2 307 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 ENTPD7Q9NQZ7 604 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 PANK4Q9NVE7 773 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 KBTBD4Q9NVX7 518 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 THEGQ9P2T0 379 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 PRG3Q9Y2Y8 225 aaPredicted RBP18.65■□□□□ 0.58
VPS52-215ENST00000464425 PLXNA4Q9HCM2 1894 aa18.65■□□□□ 0.58
VPS52-215ENST00000464425 CLDN3O15551 220 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 PRPF40AO75400 957 aaKnown RBP18.64■□□□□ 0.57
VPS52-215ENST00000464425 GTF2F1P35269 517 aaKnown RBP eCLIP18.64■□□□□ 0.57
VPS52-215ENST00000464425 GRM5P41594 1212 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 SYKP43405 635 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 LIG4P49917 911 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 UBE2HP62256 183 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 DSC1Q08554 894 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 HYAL1Q12794 435 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 GRIK3Q13003 919 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 SEZ6Q53EL9 994 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 PLPP4Q5VZY2 271 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 ZNF720Q7Z2F6 126 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 TMC7Q7Z402 723 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 RABGGTAQ92696 567 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 KCNN1Q92952 543 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 CCDC94Q9BW85 323 aaPredicted RBP18.64■□□□□ 0.57
VPS52-215ENST00000464425 LRRC27Q9C0I9 530 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 CACNG4Q9UBN1 327 aa18.64■□□□□ 0.57
VPS52-215ENST00000464425 PTGESO14684 152 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 FSCN2O14926 492 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 HNRNPDLO14979 420 aaKnown RBP18.63■□□□□ 0.57
VPS52-215ENST00000464425 PER2O15055 1255 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 SLFN14P0C7P3 912 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 SCP2P22307 547 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 YARSP54577 528 aaKnown RBP18.63■□□□□ 0.57
VPS52-215ENST00000464425 AMPD3Q01432 767 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 NOLC1Q14978 699 aaKnown RBP eCLIP18.63■□□□□ 0.57
VPS52-215ENST00000464425 GLRA4Q5JXX5 417 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 VPS52Q8N1B4 723 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 ACAP3Q96P50 834 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 HAPLN2Q9GZV7 340 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 GOLPH3LQ9H4A5 285 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 SEL1LQ9UBV2 794 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 SERTAD1Q9UHV2 236 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 COG5Q9UP83 839 aa18.63■□□□□ 0.57
VPS52-215ENST00000464425 A0A0C4DFX4 3053 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 FRMD3A2A2Y4 597 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 CARNS1A5YM72 827 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 F8W810 466 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 GADD45BO75293 160 aaPredicted RBP18.62■□□□□ 0.57
VPS52-215ENST00000464425 NR1I2O75469 434 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 THP07101 528 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 CASP1P29466 404 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 CA8P35219 290 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 AFMP43652 599 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 NRIP1P48552 1158 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 ASIC1P78348 528 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 FAM160A1Q05DH4 1040 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 MCL1Q07820 350 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 PDE12Q6L8Q7 609 aaKnown RBP18.62■□□□□ 0.57
VPS52-215ENST00000464425 DDX53Q86TM3 631 aaKnown RBP18.62■□□□□ 0.57
VPS52-215ENST00000464425 MAP4K3Q8IVH8 894 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 CCDC65Q8IXS2 484 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 FMR1NBQ8N0W7 255 aaPredicted RBP18.62■□□□□ 0.57
VPS52-215ENST00000464425 ENGASEQ8NFI3 743 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 PPP2R3CQ969Q6 453 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 VN1R3Q9BXE9 311 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 TRIM9Q9C026 710 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 BLZF1Q9H2G9 400 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 IKZF4Q9H2S9 585 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 ST6GALNAC4Q9H4F1 302 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 TLE6Q9H808 572 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 MARCH5Q9NX47 278 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 CLDND1Q9NY35 253 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 ZMYM2Q9UBW7 1377 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 BRWD1Q9NSI6 2320 aa18.62■□□□□ 0.57
VPS52-215ENST00000464425 CASTOR2A6NHX0 329 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 HIDE1A8MVS5 230 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 ANKRD63C9JTQ0 380 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 GOLGA6L22H0YM25 854 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 ACTN4O43707 911 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms