RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 ADAM28Q9UKQ2 775 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 CCDC195A0A1B0GUA6 201 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 PP2D1A8MPX8 630 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 TGM5O43548 720 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 NR1I2O75469 434 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 RECQL4O94761 1208 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 KIF4AO95239 1232 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 RBM25P49756 843 aaKnown RBP16.02■□□□□ 0.16
ALMS1-202ENST00000464408 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.16
ALMS1-202ENST00000464408 ORC2Q13416 577 aaPredicted RBP16.02■□□□□ 0.16
ALMS1-202ENST00000464408 GNL2Q13823 731 aaKnown RBP16.02■□□□□ 0.16
ALMS1-202ENST00000464408 HSP90AA2PQ14568 343 aaPredicted RBP16.02■□□□□ 0.16
ALMS1-202ENST00000464408 IL17AQ16552 155 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 TMEM132AQ24JP5 1023 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 C15orf39Q6ZRI6 1047 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 FAM184AQ8NB25 1140 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 CMASQ8NFW8 434 aaPredicted RBP16.02■□□□□ 0.16
ALMS1-202ENST00000464408 ERMNQ8TAM6 284 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 BHMT2Q9H2M3 363 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 PCDHB6Q9Y5E3 794 aa16.02■□□□□ 0.16
ALMS1-202ENST00000464408 ZMYM2Q9UBW7 1377 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 ACKR2O00590 384 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 N4BP3O15049 544 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 EIF5BO60841 1220 aaKnown RBP16.01■□□□□ 0.15
ALMS1-202ENST00000464408 TADA2AO75478 443 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 NAMPTP43490 491 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 HMGN5P82970 282 aaKnown RBP16.01■□□□□ 0.15
ALMS1-202ENST00000464408 TUSC3Q13454 348 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 MAPK6Q16659 721 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 USP41Q3LFD5 358 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 NT5DC1Q5TFE4 455 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 OTOP3Q7RTS5 596 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 ST13P5Q8NFI4 369 aaPredicted RBP16.01■□□□□ 0.15
ALMS1-202ENST00000464408 DEPTORQ8TB45 409 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 RSAD2Q8WXG1 361 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 ACSF2Q96CM8 615 aaPredicted RBP16.01■□□□□ 0.15
ALMS1-202ENST00000464408 ZSCAN31Q96LW9 406 aaPredicted RBP16.01■□□□□ 0.15
ALMS1-202ENST00000464408 MYADMQ96S97 322 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 C2orf40Q9H1Z8 148 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 KCNK12Q9HB15 430 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 LRWD1Q9UFC0 647 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 KIAA1024Q9UPX6 916 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 SSX2IPQ9Y2D8 614 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 GDAQ9Y2T3 454 aa16.01■□□□□ 0.15
ALMS1-202ENST00000464408 ZFHX2Q9C0A1 2572 aaPredicted RBP16.01■□□□□ 0.15
ALMS1-202ENST00000464408 CLUHO75153 1309 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 E9PMD0 336 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 H0Y858 1186 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 NARSO43776 548 aaKnown RBP16■□□□□ 0.15
ALMS1-202ENST00000464408 U2AF2P26368 475 aaKnown RBP eCLIP16■□□□□ 0.15
ALMS1-202ENST00000464408 CDC25AP30304 524 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 TRAPPC10P48553 1259 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 PTGDRQ13258 359 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 GLRA4Q5JXX5 417 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 HAUS3Q68CZ6 603 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 LILRA6Q6PI73 481 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 SMG7Q92540 1137 aaKnown RBP16■□□□□ 0.15
ALMS1-202ENST00000464408 WDR6Q9NNW5 1121 aaKnown RBP16■□□□□ 0.15
ALMS1-202ENST00000464408 SH2B1Q9NRF2 756 aaPredicted RBP16■□□□□ 0.15
ALMS1-202ENST00000464408 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
ALMS1-202ENST00000464408 MYH11P35749 1972 aa16■□□□□ 0.15
ALMS1-202ENST00000464408 ADAM12O43184 909 aa15.99■□□□□ 0.15
ALMS1-202ENST00000464408 GBP2P32456 591 aaPredicted RBP15.99■□□□□ 0.15
ALMS1-202ENST00000464408 CWF19L1Q69YN2 538 aaKnown RBP15.99■□□□□ 0.15
ALMS1-202ENST00000464408 KCNK18Q7Z418 384 aa15.99■□□□□ 0.15
ALMS1-202ENST00000464408 DAW1Q8N136 415 aa15.99■□□□□ 0.15
ALMS1-202ENST00000464408 IGSF22Q8N9C0 903 aa15.99■□□□□ 0.15
ALMS1-202ENST00000464408 SNX29Q8TEQ0 813 aa15.99■□□□□ 0.15
ALMS1-202ENST00000464408 RUSC1Q9BVN2 902 aa15.99■□□□□ 0.15
ALMS1-202ENST00000464408 FNIP2Q9P278 1114 aa15.99■□□□□ 0.15
ALMS1-202ENST00000464408 NOL7Q9UMY1 257 aaKnown RBP15.99■□□□□ 0.15
ALMS1-202ENST00000464408 SF3B1O75533 1304 aaKnown RBP eCLIP15.98■□□□□ 0.15
ALMS1-202ENST00000464408 VPS13AQ96RL7 3174 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 CITO14578 2027 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 THP07101 528 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 NPR3P17342 541 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 MUTP22033 750 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 TDGQ13569 410 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 ATF7IP2Q5U623 682 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 FAM171A1Q5VUB5 890 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 TAS1R3Q7RTX0 852 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 CEP57Q86XR8 500 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 CEP120Q8N960 986 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 LNX1Q8TBB1 728 aaPredicted RBP15.98■□□□□ 0.15
ALMS1-202ENST00000464408 NOTCH4Q99466 2003 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 PRRX2Q99811 253 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 CLSTN3Q9BQT9 956 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 MMTAG2Q9BU76 263 aaKnown RBP15.98■□□□□ 0.15
ALMS1-202ENST00000464408 NT5C3AQ9H0P0 336 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 GOLGA2P5Q9HBQ8 144 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.98■□□□□ 0.15
ALMS1-202ENST00000464408 DUSP12Q9UNI6 340 aa15.98■□□□□ 0.15
ALMS1-202ENST00000464408 GALR2O43603 387 aaPredicted RBP15.97■□□□□ 0.15
ALMS1-202ENST00000464408 PI15O43692 258 aa15.97■□□□□ 0.15
ALMS1-202ENST00000464408 HIP1RO75146 1068 aa15.97■□□□□ 0.15
ALMS1-202ENST00000464408 CD2BP2O95400 341 aaKnown RBP15.97■□□□□ 0.15
ALMS1-202ENST00000464408 PAPLNO95428 1278 aa15.97■□□□□ 0.15
ALMS1-202ENST00000464408 PPP2R5AQ15172 486 aa15.97■□□□□ 0.15
ALMS1-202ENST00000464408 PSMD5Q16401 504 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms