RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RBM47A0AV96 593 aaKnown RBP23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 PDE2AO00408 941 aaPredicted RBP23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 ZC3H11AO75152 810 aaKnown RBP eCLIP23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 RHOXF2BP0C7M4 288 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 NOP2P46087 812 aaKnown RBP23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 NLRP11P59045 1033 aaKnown RBP23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 ITIH3Q06033 890 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 ZPBP2Q6X784 338 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 C15orf39Q6ZRI6 1047 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 FAM71AQ8IYT1 594 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 LMBR1Q8WVP7 490 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 SHC3Q92529 594 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 ZBTB45Q96K62 511 aaPredicted RBP23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 FAM81BQ96LP2 452 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 KREMEN1Q96MU8 473 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 FNBP1Q96RU3 617 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 RHOXF2Q9BQY4 288 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 MSTO1Q9BUK6 570 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 SUGCTQ9HAC7 445 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 KAT6AQ92794 2004 aa23.45■■□□□ 1.35
PDLIM2-216ENST00000464275 A0A0B4J269 797 aa23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 CELF2O95319 508 aaKnown RBP23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 TMEM253P0C7T8 217 aa23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 MATR3P43243 847 aaKnown RBP eCLIP23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 ARHGAP1Q07960 439 aa23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 MKRN4PQ13434 485 aaPredicted RBP23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 TMEM63BQ5T3F8 832 aa23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 CDCA2Q69YH5 1023 aaPredicted RBP23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 CRELD2Q6UXH1 353 aaPredicted RBP23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 HELQQ8TDG4 1101 aa23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 COG1Q8WTW3 980 aa23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 KAT5Q92993 513 aa23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 RRAGCQ9HB90 399 aa23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 TRPC6Q9Y210 931 aa23.45■■□□□ 1.34
PDLIM2-216ENST00000464275 NCANO14594 1321 aa23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 LAMTOR4Q0VGL1 99 aa23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 ZBTB8OSQ8IWT0 167 aa23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 PARK7Q99497 189 aaKnown RBP23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 CCDC113Q9H0I3 377 aa23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 C2orf40Q9H1Z8 148 aa23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 MED4Q9NPJ6 270 aa23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 RNF14Q9UBS8 474 aa23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 ZNF236Q9UL36 1845 aa23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 ADGRA2Q96PE1 1338 aa23.44■■□□□ 1.34
PDLIM2-216ENST00000464275 FTCDO95954 541 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 GH1P01241 217 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 EDN1P05305 212 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 ACOT2P49753 483 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 CCDC70Q6NSX1 233 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 DNAAF5Q86Y56 855 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 ZNF516Q92618 1163 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 MRPL4Q9BYD3 311 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 USP8P40818 1118 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 PAFAH1B1P43034 410 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 PRPF4BQ13523 1007 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 CCDC181Q5TID7 509 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 ENOSF1Q7L5Y1 443 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 TPCN2Q8NHX9 752 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 SEPT11Q9NVA2 429 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 RBAKQ9NYW8 714 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 ERAP1Q9NZ08 941 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 ANKFY1Q9P2R3 1169 aa23.43■■□□□ 1.34
PDLIM2-216ENST00000464275 ANK1P16157 1881 aa23.42■■□□□ 1.34
PDLIM2-216ENST00000464275 MSCO60682 206 aa23.42■■□□□ 1.34
PDLIM2-216ENST00000464275 TNNI1P19237 187 aa23.42■■□□□ 1.34
PDLIM2-216ENST00000464275 CASP8Q14790 479 aa23.42■■□□□ 1.34
PDLIM2-216ENST00000464275 LRRC71Q8N4P6 559 aa23.42■■□□□ 1.34
PDLIM2-216ENST00000464275 LRRC57Q8N9N7 239 aa23.42■■□□□ 1.34
PDLIM2-216ENST00000464275 SLC20A1Q8WUM9 679 aa23.42■■□□□ 1.34
PDLIM2-216ENST00000464275 CTNNBL1Q8WYA6 563 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-216ENST00000464275 SUCLA2Q9P2R7 463 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-216ENST00000464275 C4BPAP04003 597 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 GCNT1Q02742 428 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 TFDP1Q14186 410 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 ZACNQ401N2 412 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 HSP90B2PQ58FF3 399 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 ZNF484Q5JVG2 852 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 MAMDC4Q6UXC1 1216 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 GPR142Q7Z601 462 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 RPUSD2Q8IZ73 545 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 FAM71BQ8TC56 605 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 EMID1Q96A84 441 aaPredicted RBP23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 ANKRD62A6NC57 917 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 TMCO5BA8MYB1 307 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 CLDN3O15551 220 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 SGPL1O95470 568 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 SRGAP2CP0DJJ0 459 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 CXCR5P32302 372 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 GRB14Q14449 540 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 FAM110CQ1W6H9 321 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 SYCE1Q8N0S2 351 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 MMGT1Q8N4V1 131 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 RNF149Q8NC42 400 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 RFFLQ8WZ73 363 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 TATDN2Q93075 761 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 PSMB7Q99436 277 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 CGRRF1Q99675 332 aa23.41■■□□□ 1.34
PDLIM2-216ENST00000464275 KATNBL1Q9H079 304 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms