RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 TIPINQ9BVW5 301 aa22.64■■□□□ 1.21
PDLIM4-205ENST00000463615 GPR62Q9BZJ7 368 aa22.64■■□□□ 1.21
PDLIM4-205ENST00000463615 TMEM134Q9H6X4 195 aa22.64■■□□□ 1.21
PDLIM4-205ENST00000463615 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.64■■□□□ 1.21
PDLIM4-205ENST00000463615 SNTG2Q9NY99 539 aa22.64■■□□□ 1.21
PDLIM4-205ENST00000463615 FNIP2Q9P278 1114 aa22.64■■□□□ 1.21
PDLIM4-205ENST00000463615 DENND4AQ7Z401 1863 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 C2CD4DB7Z1M9 353 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 RECQL4O94761 1208 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 MAPK7Q13164 816 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 HSP90AA2PQ14568 343 aaPredicted RBP22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 EEF1DP3Q658K8 133 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 MCTP1Q6DN14 999 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 RINT1Q6NUQ1 792 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 NTPCRQ9BSD7 190 aaKnown RBP22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 KIFC3Q9BVG8 833 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 ARHGAP28Q9P2N2 729 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 TNFSF13BQ9Y275 285 aa22.63■■□□□ 1.21
PDLIM4-205ENST00000463615 K7ERI5 159 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 THP07101 528 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 GUCY2CP25092 1073 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 CDC25AP30304 524 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 NPTX2P47972 431 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 CREMQ03060 361 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 ATF7IP2Q5U623 682 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 KANK3Q6NY19 840 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 ELMSAN1Q6PJG2 1045 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 TMC5Q6UXY8 1006 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 KCNK18Q7Z418 384 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 APBB1IPQ7Z5R6 666 aaPredicted RBP22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 PLCD3Q8N3E9 789 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 ASIC4Q96FT7 647 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 DRC1Q96MC2 740 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 PTPRHQ9HD43 1115 aa22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 RBM19Q9Y4C8 960 aaKnown RBP22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.62■■□□□ 1.21
PDLIM4-205ENST00000463615 SF3B1O75533 1304 aaKnown RBP eCLIP22.61■■□□□ 1.211e-7■■■■■ 172.3
PDLIM4-205ENST00000463615 H3BQV1 296 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 C2CD2LO14523 706 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 SLC26A4O43511 780 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 HIP1RO75146 1068 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 GLUD1P00367 558 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 WEE2P0C1S8 567 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 TMEM132AQ24JP5 1023 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 RUSC1Q9BVN2 902 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 NT5C3AQ9H0P0 336 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 PLEKHA4Q9H4M7 779 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 POLD4Q9HCU8 107 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 KCNG1Q9UIX4 513 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 SORCS3Q9UPU3 1222 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 SMC3Q9UQE7 1217 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 USP20Q9Y2K6 914 aa22.61■■□□□ 1.21
PDLIM4-205ENST00000463615 TADA2AO75478 443 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 PEX3P56589 373 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 DMP1Q13316 513 aaPredicted RBP22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 LILRA6Q6PI73 481 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 UBALD2Q8IYN6 164 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 TDRD5Q8NAT2 981 aaKnown RBP22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 KCNN1Q92952 543 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 PBXIP1Q96AQ6 731 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 PNMA5Q96PV4 448 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 ACO2Q99798 780 aaKnown RBP22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 PAAF1Q9BRP4 392 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 MAN1C1Q9NR34 630 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 TSHZ2Q9NRE2 1034 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 KCND2Q9NZV8 630 aa22.6■■□□□ 1.21
PDLIM4-205ENST00000463615 PIEZO1Q92508 2521 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 ZDBF2Q9HCK1 2354 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 TMEM189-UBE2V1I3L0A0 370 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 BRD1O95696 1058 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 HOXD11P31277 338 aaPredicted RBP22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 ELAVL2Q12926 359 aaKnown RBP22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 XKR4Q5GH76 650 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 CCDC149Q6ZUS6 474 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 TAS1R3Q7RTX0 852 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 SYT2Q8N9I0 419 aaPredicted RBP22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 KREMEN2Q8NCW0 462 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 FEZF2Q8TBJ5 459 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 SPIRE2Q8WWL2 714 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 AK8Q96MA6 479 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 PPP1R10Q96QC0 940 aaKnown RBP22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 CXCL16Q9H2A7 254 aa22.59■■□□□ 1.21
PDLIM4-205ENST00000463615 CCDC169A6NNP5 214 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 KIF4AO95239 1232 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 LIG1P18858 919 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 PROZP22891 400 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 SP100P23497 879 aaPredicted RBP22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 GRM5P41594 1212 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 MTMR3Q13615 1198 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 TMEM119Q4V9L6 283 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 LARP1BQ659C4 914 aaKnown RBP22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 OTOP3Q7RTS5 596 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 FBXL6Q8N531 539 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 RIN2Q8WYP3 895 aaPredicted RBP22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 PIK3R5Q8WYR1 880 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 B3GALT6Q96L58 329 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 MRPL4Q9BYD3 311 aaKnown RBP22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 KMT5AQ9NQR1 393 aa22.58■■□□□ 1.21
PDLIM4-205ENST00000463615 PLXNA3P51805 1871 aa22.58■■□□□ 1.2
PDLIM4-205ENST00000463615 CASTOR2A6NHX0 329 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms