RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 FAM167BQ9BTA0 163 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 RRAGCQ9HB90 399 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 RBAK-RBAKDNI3L0D1 243 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 KLF4O43474 513 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 TCEA3O75764 348 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 KIF5BP33176 963 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 ZNF131P52739 623 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 RNASE9P60153 205 aaKnown RBP9.34□□□□□ -0.91
SHQ1-203ENST00000463369 GFPT1Q06210 699 aaPredicted RBP9.34□□□□□ -0.91
SHQ1-203ENST00000463369 RRP1BQ14684 758 aaKnown RBP9.34□□□□□ -0.91
SHQ1-203ENST00000463369 PKN1Q16512 942 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 ABCB5Q2M3G0 1257 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 GNPTABQ3T906 1256 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 GALNTL6Q49A17 601 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 CCDC38Q502W7 563 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 IL31Q6EBC2 164 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 SULF1Q8IWU6 871 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 LRRC34Q8IZ02 419 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 CPXCR1Q8N123 301 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 SCFD2Q8WU76 684 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 ATXN2LQ8WWM7 1075 aaKnown RBP9.34□□□□□ -0.91
SHQ1-203ENST00000463369 PRCCQ92733 491 aaPredicted RBP9.34□□□□□ -0.91
SHQ1-203ENST00000463369 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 CEP95Q96GE4 821 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 ELAC2Q9BQ52 826 aaKnown RBP9.34□□□□□ -0.91
SHQ1-203ENST00000463369 NEUROG2Q9H2A3 272 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 KMT5AQ9NQR1 393 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 MTMR4Q9NYA4 1195 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 RGL1Q9NZL6 768 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 SAMD15Q9P1V8 674 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 NOD1Q9Y239 953 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 SIK3Q9Y2K2 1263 aa9.34□□□□□ -0.91
SHQ1-203ENST00000463369 SSU72P8A0A1W2PR75 194 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 A0A1W2PRQ8 180 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 SPDYE3A6NKU9 549 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 IGF2BP3O00425 579 aaKnown RBP eCLIP9.33□□□□□ -0.92
SHQ1-203ENST00000463369 CES2O00748 559 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 ABLIM1O14639 778 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 EPHB6O15197 1021 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 EVI5O60447 810 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 NPTXRO95502 500 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 FTCDO95954 541 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 MMEP08473 750 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 CHN1P15882 459 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 CCNE1P24864 410 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 STAT6P42226 847 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 SLC1A4P43007 532 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 ST13P50502 369 aaKnown RBP9.33□□□□□ -0.92
SHQ1-203ENST00000463369 DNA2P51530 1060 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 NEK3P51956 506 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 EIF3BP55884 814 aaKnown RBP9.33□□□□□ -0.92
SHQ1-203ENST00000463369 WASHC5Q12768 1159 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 LAMB3Q13751 1172 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 RAB33AQ14088 237 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 TAF11Q15544 211 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 NAB2Q15742 525 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 SUPT20HL1Q3ZLR7 823 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 PRAMEF18Q5VWM3 479 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 DCAF15Q66K64 600 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 ANKRD40Q6AI12 368 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 C16orf54Q6UWD8 224 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 TMEM179Q6ZVK1 233 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 EZH1Q92800 747 aaPredicted RBP9.33□□□□□ -0.92
SHQ1-203ENST00000463369 NELL1Q92832 810 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 P2RX5Q93086 422 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 EEF2KMTQ96G04 330 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 ECT2Q9H8V3 914 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 ARHGEF3Q9NR81 526 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 ABCF3Q9NUQ8 709 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 ADAM22Q9P0K1 906 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 LRRC42Q9Y546 428 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 PARP14Q460N5 1801 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 SSC5DA1L4H1 1573 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 LRRD1A4D1F6 860 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 LRRC53A6NM62 1247 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 F8VZ95 297 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 DKK1O94907 266 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 UBOX5O94941 541 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 GDF11O95390 407 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 IGHA2P01877 340 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 KRT16P08779 473 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 LONP1P36776 959 aaKnown RBP9.33□□□□□ -0.92
SHQ1-203ENST00000463369 CAP2P40123 477 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 MMP13P45452 471 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 JAG1P78504 1218 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 PLCB3Q01970 1234 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 TROAPQ12815 778 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 NR1H3Q13133 447 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 PPP2R5BQ15173 497 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 RRAGAQ7L523 313 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 TMC3Q7Z5M5 1100 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 CATIPQ7Z7H3 387 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 STAG2Q8N3U4 1231 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 CRELD1Q96HD1 420 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 TMEM47Q9BQJ4 181 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 ZNF341Q9BYN7 854 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 CCDC134Q9H6E4 229 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 FAM207AQ9NSI2 230 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms