RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SYT2Q8N9I0 419 aaPredicted RBP8.02□□□□□ -1.13
PTPRF-210ENST00000463041 AK8Q96MA6 479 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 DRC1Q96MC2 740 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 APOL5Q9BWW9 433 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 KCNH6Q9H252 994 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 POLD4Q9HCU8 107 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 MARCH5Q9NX47 278 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 SNTG2Q9NY99 539 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 FNIP2Q9P278 1114 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 RAPGEFL1Q9UHV5 662 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 ADAM28Q9UKQ2 775 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 TNFSF13BQ9Y275 285 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 USTQ9Y2C2 406 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 ZNF318Q5VUA4 2279 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 WDFY4Q6ZS81 3184 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 VWA3AA6NCI4 1184 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 PP2D1A8MPX8 630 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 C2CD2LO14523 706 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 TEX28O15482 410 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 HIP1RO75146 1068 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 LIG1P18858 919 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 PDCP20941 246 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 GUCY2CP25092 1073 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 NPTX2P47972 431 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 SMTNP53814 917 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 CREMQ03060 361 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 ELAVL2Q12926 359 aaKnown RBP8.01□□□□□ -1.13
PTPRF-210ENST00000463041 DMP1Q13316 513 aaPredicted RBP8.01□□□□□ -1.13
PTPRF-210ENST00000463041 CUL4AQ13619 759 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 HSP90AA2PQ14568 343 aaPredicted RBP8.01□□□□□ -1.13
PTPRF-210ENST00000463041 ATF7IP2Q5U623 682 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 EEF1DP3Q658K8 133 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 FUT10Q6P4F1 479 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 DCLRE1AQ6PJP8 1040 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 TMC5Q6UXY8 1006 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 C15orf39Q6ZRI6 1047 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 TRIM67Q6ZTA4 783 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 BRAPQ7Z569 592 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 GPR149Q86SP6 731 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 ZDHHC14Q8IZN3 488 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 DAW1Q8N136 415 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 CMASQ8NFW8 434 aaPredicted RBP8.01□□□□□ -1.13
PTPRF-210ENST00000463041 SPIRE2Q8WWL2 714 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 FAM122AQ96E09 287 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 CDK5RAP3Q96JB5 506 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 ACO2Q99798 780 aaKnown RBP8.01□□□□□ -1.13
PTPRF-210ENST00000463041 MRPL4Q9BYD3 311 aaKnown RBP8.01□□□□□ -1.13
PTPRF-210ENST00000463041 RHOBTB2Q9BYZ6 727 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 GPR62Q9BZJ7 368 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 PLEKHA4Q9H4M7 779 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 POMKQ9H5K3 350 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 SFXN1Q9H9B4 322 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 KMT5AQ9NQR1 393 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 KCND2Q9NZV8 630 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 ARHGAP28Q9P2N2 729 aa8.01□□□□□ -1.13
PTPRF-210ENST00000463041 PIEZO1Q92508 2521 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 CCDC195A0A1B0GUA6 201 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 TMEM221A6NGB7 291 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 SPDYE4A6NLX3 237 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 SFI1A8K8P3 1242 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 M0R296 226 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 PTGESO14684 152 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 RECQL4O94761 1208 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 PAPLNO95428 1278 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 GLUD1P00367 558 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 PLA2G4BP0C869 781 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 SCP2P22307 547 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 LONP1P36776 959 aaKnown RBP8□□□□□ -1.13
PTPRF-210ENST00000463041 PLA2G5P39877 138 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 UBA7P41226 1012 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 YARSP54577 528 aaKnown RBP8□□□□□ -1.13
PTPRF-210ENST00000463041 SLC12A3P55017 1021 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 SIGLEC14Q08ET2 396 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 MAPK7Q13164 816 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 ZRSR1Q15695 479 aaKnown RBP8□□□□□ -1.13
PTPRF-210ENST00000463041 NAB2Q15742 525 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 PTPN21Q16825 1174 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 XKR4Q5GH76 650 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 KANK3Q6NY19 840 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 PDXDC1Q6P996 788 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 LILRA6Q6PI73 481 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 ALKAL1Q6UXT8 129 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 HFE2Q6ZVN8 426 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 KCNK18Q7Z418 384 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 UBALD2Q8IYN6 164 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 RIN2Q8WYP3 895 aaPredicted RBP8□□□□□ -1.13
PTPRF-210ENST00000463041 PBXIP1Q96AQ6 731 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 ACSF2Q96CM8 615 aaPredicted RBP8□□□□□ -1.13
PTPRF-210ENST00000463041 CALML4Q96GE6 196 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 PNMA5Q96PV4 448 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 TCHPQ9BT92 498 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 TTPALQ9BTX7 342 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 KIFC3Q9BVG8 833 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 RUSC1Q9BVN2 902 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 CCDC94Q9BW85 323 aaPredicted RBP8□□□□□ -1.13
PTPRF-210ENST00000463041 PTPRHQ9HD43 1115 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
PTPRF-210ENST00000463041 TOPORSQ9NS56 1045 aaPredicted RBP8□□□□□ -1.13
PTPRF-210ENST00000463041 LARSQ9P2J5 1176 aaKnown RBP8□□□□□ -1.13
PTPRF-210ENST00000463041 USP20Q9Y2K6 914 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms