RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 ITGB2P05107 769 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 LTA4HP09960 611 aaKnown RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 SRGNP10124 158 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 HSD3B1P14060 373 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 HNRNPLP14866 589 aaKnown RBP eCLIP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 MALP21145 153 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ECHS1P30084 290 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ADCY8P40145 1251 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 HSPA7P48741 367 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 MAP3K12Q12852 859 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 BLMHQ13867 455 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 UBE3CQ15386 1083 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 STILQ15468 1287 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ARL13BQ3SXY8 428 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 PLEKHN1Q494U1 663 aaPredicted RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 KHDC1LQ5JSQ8 128 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 GRAMD4Q6IC98 578 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ZC3H14Q6PJT7 736 aaKnown RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ZC3H18Q86VM9 953 aaKnown RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 STPG3Q8N7X2 389 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 DTX3Q8N9I9 347 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 PPP1R14CQ8TAE6 165 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ABHD4Q8TB40 342 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 CDC5LQ99459 802 aaKnown RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 EIF2AK1Q9BQI3 630 aaKnown RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 PDCD2LQ9BRP1 358 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ISCA1Q9BUE6 129 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 TTLL2Q9BWV7 592 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 HAPLN2Q9GZV7 340 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 LDAHQ9H6V9 325 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 DLL4Q9NR61 685 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 CNNM1Q9NRU3 951 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 SACM1LQ9NTJ5 587 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 POLR3BQ9NW08 1133 aaPredicted RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 KLHL14Q9P2G3 628 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 SAE1Q9UBE0 346 aaPredicted RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 CCDC39Q9UFE4 941 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ZFP69BQ9UJL9 534 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 YBX2Q9Y2T7 364 aaKnown RBP4.59□□□□□ -1.67
GPNMB-205ENST00000463011 SLC4A7Q9Y6M7 1214 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 MYBBP1AQ9BQG0 1328 aaKnown RBP4.58□□□□□ -1.68
GPNMB-205ENST00000463011 PRRT4C9JH25 899 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 M0R3H8 397 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 FFAR2O15552 330 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 DYRK3O43781 588 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 PHF2O75151 1096 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 PRNPP04156 253 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 AMY1AP04745 511 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 TLE1Q04724 770 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 SIM2Q14190 667 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-205ENST00000463011 RAB39AQ14964 217 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 MPEG1Q2M385 716 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 WDR72Q3MJ13 1102 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 FLYWCH1Q4VC44 716 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 C3orf38Q5JPI3 329 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 JAKMIP3Q5VZ66 844 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 INTS5Q6P9B9 1019 aaKnown RBP4.58□□□□□ -1.68
GPNMB-205ENST00000463011 DPP8Q6V1X1 898 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-205ENST00000463011 OTOP2Q7RTS6 562 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 STK32CQ86UX6 486 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 PPP1R3BQ86XI6 285 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 PQLC1Q8N2U9 271 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 TXLNBQ8N3L3 684 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 ZGPATQ8N5A5 531 aaKnown RBP4.58□□□□□ -1.68
GPNMB-205ENST00000463011 PIK3C3Q8NEB9 887 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 IFI44Q8TCB0 444 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 SNX33Q8WV41 574 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 ZNF566Q969W8 418 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 GCC1Q96CN9 775 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 MPP4Q96JB8 637 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 MRGPRX1Q96LB2 322 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 PPP1R16BQ96T49 567 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 UHRF1Q96T88 793 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-205ENST00000463011 PAK6Q9NQU5 681 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-205ENST00000463011 STK32BQ9NY57 414 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 RRN3Q9NYV6 651 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 CALCOCO1Q9P1Z2 691 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 FEZ2Q9UHY8 353 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-205ENST00000463011 ADAMTS6Q9UKP5 1117 aa4.58□□□□□ -1.68
GPNMB-205ENST00000463011 H0Y858 1186 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 COBLO75128 1261 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 FSBPO95073 299 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 PYGLP06737 847 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 THP07101 528 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 C8BP07358 591 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 GAAP10253 952 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 COL6A1P12109 1028 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 SREBF1P36956 1147 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 ALDH9A1P49189 494 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 MEF2AQ02078 507 aaPredicted RBP4.57□□□□□ -1.68
GPNMB-205ENST00000463011 PPFIA1Q13136 1202 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 GRM1Q13255 1194 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 PLCL1Q15111 1095 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 MAN2A1Q16706 1144 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 MST1LQ2TV78 715 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 PDZD4Q76G19 769 aaPredicted RBP4.57□□□□□ -1.68
GPNMB-205ENST00000463011 CXXC5Q7LFL8 322 aaKnown RBP4.57□□□□□ -1.68
GPNMB-205ENST00000463011 PCGF5Q86SE9 256 aa4.57□□□□□ -1.68
GPNMB-205ENST00000463011 VSIG10LQ86VR7 867 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms