RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CSTF1Q05048 431 aaKnown RBP8.67□□□□□ -1.02
SMC3-202ENST00000462899 SNW1Q13573 536 aaKnown RBP8.67□□□□□ -1.02
SMC3-202ENST00000462899 AAMPQ13685 434 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 AMHR2Q16671 573 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 SLC44A4Q53GD3 710 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 JAKMIP3Q5VZ66 844 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 APOA5Q6Q788 366 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 NFXL1Q6ZNB6 911 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 MICU3Q86XE3 530 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 PARP9Q8IXQ6 854 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 SMG8Q8ND04 991 aaKnown RBP8.67□□□□□ -1.02
SMC3-202ENST00000462899 ST13P5Q8NFI4 369 aaPredicted RBP8.67□□□□□ -1.02
SMC3-202ENST00000462899 URGCPQ8TCY9 931 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 PGBD4Q96DM1 585 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 ZMYND12Q9H0C1 365 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 DISC1Q9NRI5 854 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 FBXW11Q9UKB1 542 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 FAN1Q9Y2M0 1017 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 SLC12A7Q9Y666 1083 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 GCN1Q92616 2671 aaKnown RBP8.67□□□□□ -1.02
SMC3-202ENST00000462899 FAM170BA6NMN3 283 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 MSH4O15457 936 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 LRP3O75074 770 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 MAFO75444 373 aaPredicted RBP8.66□□□□□ -1.02
SMC3-202ENST00000462899 POMCP01189 267 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 ALDH2P05091 517 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 POU2F2P09086 479 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 SPATA31D3P0C874 917 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 MYBP10242 640 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 PMLP29590 882 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 PPM1JQ5JR12 505 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 ELMSAN1Q6PJG2 1045 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 TSSK4Q6SA08 328 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 SPATA31D4Q6ZUB0 917 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 KSR1Q8IVT5 923 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 GSTCDQ8NEC7 633 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 EXOC6Q8TAG9 804 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 NETO1Q8TDF5 533 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 RUFY2Q8WXA3 655 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 ATRIPQ8WXE1 791 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 SLC5A5Q92911 643 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 SCLT1Q96NL6 688 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 FAM126AQ9BYI3 521 aaPredicted RBP8.66□□□□□ -1.02
SMC3-202ENST00000462899 LRRC2Q9BYS8 371 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 GPR62Q9BZJ7 368 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 INO80BQ9C086 356 aaPredicted RBP8.66□□□□□ -1.02
SMC3-202ENST00000462899 LSG1Q9H089 658 aaKnown RBP8.66□□□□□ -1.02
SMC3-202ENST00000462899 MINDY3Q9H8M7 445 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 NRBP2Q9NSY0 501 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 RBM28Q9NW13 759 aaKnown RBP8.66□□□□□ -1.02
SMC3-202ENST00000462899 KANSL3Q9P2N6 904 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 RALYQ9UKM9 306 aaKnown RBP8.66□□□□□ -1.02
SMC3-202ENST00000462899 CDH7Q9ULB5 785 aa8.66□□□□□ -1.02
SMC3-202ENST00000462899 PRG3Q9Y2Y8 225 aaPredicted RBP8.66□□□□□ -1.02
SMC3-202ENST00000462899 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.66□□□□□ -1.02
SMC3-202ENST00000462899 KIF26AQ9ULI4 1882 aaPredicted RBP8.66□□□□□ -1.02
SMC3-202ENST00000462899 NID2Q14112 1375 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 PSMD10O75832 226 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 CD72P21854 359 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 FSHRP23945 695 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 HOXA9P31269 272 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 SFNP31947 248 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 COPS2P61201 443 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 NTHL1P78549 312 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 SHC2P98077 582 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 UBXN2BQ14CS0 331 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 PFKFB3Q16875 520 aaPredicted RBP8.65□□□□□ -1.02
SMC3-202ENST00000462899 MTERF2Q49AM1 385 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 PRR16Q569H4 304 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 ANO5Q75V66 913 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 MTSS1LQ765P7 747 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 CATSPER4Q7RTX7 472 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 RHPN2Q8IUC4 686 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 RDM1Q8NG50 284 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 FGF13Q92913 245 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 SECISBP2LQ93073 1101 aaKnown RBP8.65□□□□□ -1.02
SMC3-202ENST00000462899 B3GALT6Q96L58 329 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 RIT2Q99578 217 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 SH2D3AQ9BRG2 576 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 UNC45AQ9H3U1 944 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 RWDD1Q9H446 243 aaPredicted RBP8.65□□□□□ -1.02
SMC3-202ENST00000462899 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMC3-202ENST00000462899 MIOSQ9NXC5 875 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 SUCLA2Q9P2R7 463 aaPredicted RBP8.65□□□□□ -1.02
SMC3-202ENST00000462899 BRPF3Q9ULD4 1205 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 USP18Q9UMW8 372 aa8.65□□□□□ -1.02
SMC3-202ENST00000462899 V9GY48 417 aaPredicted RBP8.65□□□□□ -1.02
SMC3-202ENST00000462899 SDK1Q7Z5N4 2213 aa8.65□□□□□ -1.03
SMC3-202ENST00000462899 ZMYM2Q9UBW7 1377 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 ARL5CA6NH57 179 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 SLC27A2O14975 620 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 GAS2O43903 313 aaKnown RBP8.64□□□□□ -1.03
SMC3-202ENST00000462899 HNRNPA1P09651 372 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMC3-202ENST00000462899 CDC27P30260 824 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 JAK3P52333 1124 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 PFKPQ01813 784 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 SPEM2Q0P670 501 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 MTAPQ13126 283 aa8.64□□□□□ -1.03
SMC3-202ENST00000462899 NECTIN1Q15223 517 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms