RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ZNF384Q8TF68 577 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 TBC1D22AQ8WUA7 517 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 JAKMIP1Q96N16 626 aaKnown RBP8.59□□□□□ -1.03
UBE4B-204ENST00000462658 UPF3BQ9BZI7 483 aaKnown RBP8.59□□□□□ -1.03
UBE4B-204ENST00000462658 CD244Q9BZW8 370 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 MYOTQ9UBF9 498 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 LTBP1Q14766 1721 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 DUOX1Q9NRD9 1551 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 SNED1Q8TER0 1413 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 GSG1L2A8MUP6 293 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 SEMA7AO75326 666 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 ASLP04424 464 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 AMY2AP04746 511 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 LDHCP07864 332 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 AMY2BP19961 511 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 IGFALSP35858 605 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 MCM2P49736 904 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 JAM2P57087 298 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 DYNLL1P63167 89 aaKnown RBP8.58□□□□□ -1.04
UBE4B-204ENST00000462658 KIAA2012Q0VF49 1180 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 ALX1Q15699 326 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 IMMTQ16891 758 aaKnown RBP8.58□□□□□ -1.04
UBE4B-204ENST00000462658 MFSD14BQ5SR56 506 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 TTLL5Q6EMB2 1281 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 CNNM4Q6P4Q7 775 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 ARHGAP36Q6ZRI8 547 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 RUFY3Q7L099 469 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 UHMK1Q8TAS1 419 aaKnown RBP8.58□□□□□ -1.04
UBE4B-204ENST00000462658 MZB1Q8WU39 189 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 RIOK1Q9BRS2 568 aaKnown RBP8.58□□□□□ -1.04
UBE4B-204ENST00000462658 SMOC1Q9H4F8 434 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 MAGEC2Q9UBF1 373 aaPredicted RBP8.58□□□□□ -1.04
UBE4B-204ENST00000462658 ASH2LQ9UBL3 628 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 DSEQ9UL01 958 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 PCDHA5Q9Y5H7 936 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 CYP46A1Q9Y6A2 500 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 SLC4A4Q9Y6R1 1079 aa8.58□□□□□ -1.04
UBE4B-204ENST00000462658 DOCK2Q92608 1830 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 ZNF213O14771 459 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 PRKAB2O43741 272 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 ECE2O60344 883 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 KRT1P04264 644 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 TMEM253P0C7T8 217 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 CPA1P15085 419 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 ATF2P15336 505 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 CRY1Q16526 586 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 EGFLAMQ63HQ2 1017 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 ZCCHC8Q6NZY4 707 aaKnown RBP8.57□□□□□ -1.04
UBE4B-204ENST00000462658 BLOC1S2Q6QNY1 142 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 PTRH1Q86Y79 214 aaKnown RBP8.57□□□□□ -1.04
UBE4B-204ENST00000462658 IGDCC3Q8IVU1 814 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 POU5F2Q8N7G0 328 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 CLEC4DQ8WXI8 215 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 TTC14Q96N46 770 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 NEK1Q96PY6 1258 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 PSMD1Q99460 953 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 NACAP1Q9BZK3 213 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 NAPBQ9H115 298 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 DBNDD1Q9H9R9 158 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 PDRG1Q9NUG6 133 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 TELO2Q9Y4R8 837 aa8.57□□□□□ -1.04
UBE4B-204ENST00000462658 RPAP1Q9BWH6 1393 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-204ENST00000462658 MYO5AQ9Y4I1 1855 aaKnown RBP8.56□□□□□ -1.04
UBE4B-204ENST00000462658 E7EWF7 191 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 N4BP3O15049 544 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 PPIP5K2O43314 1243 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 BAG3O95817 575 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 HMGB1P09429 215 aaKnown RBP8.56□□□□□ -1.04
UBE4B-204ENST00000462658 C1QTNF9P0C862 333 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 JMJD7P0C870 316 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 RPS6KB1P23443 525 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 TDO2P48775 406 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 HAND2P61296 217 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 GRIN1Q05586 938 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 TUSC3Q13454 348 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 GPR19Q15760 415 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 ATG14Q6ZNE5 492 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 STOX1Q6ZVD7 989 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 OVCH1Q7RTY7 1134 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 FAM26EQ8N5C1 309 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 MFSD3Q96ES6 412 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 NOL10Q9BSC4 688 aaKnown RBP8.56□□□□□ -1.04
UBE4B-204ENST00000462658 CELF4Q9BZC1 486 aaKnown RBP8.56□□□□□ -1.04
UBE4B-204ENST00000462658 CRNKL1Q9BZJ0 848 aaKnown RBP8.56□□□□□ -1.04
UBE4B-204ENST00000462658 VPS33BQ9H267 617 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 SMURF1Q9HCE7 757 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 EPB41L4AQ9HCS5 686 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-204ENST00000462658 AATFQ9NY61 560 aaKnown RBP eCLIP8.56□□□□□ -1.04
UBE4B-204ENST00000462658 SAMD15Q9P1V8 674 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 PLAAQ9Y263 795 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 MYH7P12883 1935 aa8.56□□□□□ -1.04
UBE4B-204ENST00000462658 DICER1Q9UPY3 1922 aaKnown RBP8.56□□□□□ -1.04
UBE4B-204ENST00000462658 MROH7-TTC4A0A0A0MT08 1334 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 ZMYM6O95789 1325 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 ZNF561-AS1K7EIQ3 104 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 GSTA4O15217 222 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 BUB1BO60566 1050 aaPredicted RBP8.55□□□□□ -1.04
UBE4B-204ENST00000462658 MAFKO60675 156 aa8.55□□□□□ -1.04
UBE4B-204ENST00000462658 HSP90AA1P07900 732 aaKnown RBP8.55□□□□□ -1.04
UBE4B-204ENST00000462658 STAT5AP42229 794 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms