RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ZBED3Q96IU2 234 aaPredicted RBP18.18■□□□□ 0.5
ACTB-207ENST00000462494 WNK4Q96J92 1243 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
ACTB-207ENST00000462494 PABPC3Q9H361 631 aaKnown RBP18.18■□□□□ 0.5
ACTB-207ENST00000462494 GRHL1Q9NZI5 618 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 PCYOX1Q9UHG3 505 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 MTUS1Q9ULD2 1270 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 MTA2O94776 668 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 CYP1A2P05177 515 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 KCNJ1P48048 391 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 GPC3P51654 580 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 ZNF772Q68DY9 489 aaPredicted RBP18.18■□□□□ 0.5
ACTB-207ENST00000462494 SLC39A4Q6P5W5 647 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 HOOK3Q86VS8 718 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 UHMK1Q8TAS1 419 aaKnown RBP18.18■□□□□ 0.5
ACTB-207ENST00000462494 MORC4Q8TE76 937 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 KIFAP3Q92845 792 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 CYFIP2Q96F07 1278 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 BICD1Q96G01 975 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 EPB41L4BQ9H329 900 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 GTF3C4Q9UKN8 822 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 USP20Q9Y2K6 914 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 RIPK3Q9Y572 518 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 PCDHA10Q9Y5I2 948 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 PODXLO00592 558 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 HNRNPDLO14979 420 aaKnown RBP18.17■□□□□ 0.5
ACTB-207ENST00000462494 GGPS1O95749 300 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 EGFRP00533 1210 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 DRG2P55039 364 aaKnown RBP18.17■□□□□ 0.5
ACTB-207ENST00000462494 MKRN4PQ13434 485 aaPredicted RBP18.17■□□□□ 0.5
ACTB-207ENST00000462494 SV2AQ7L0J3 742 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 OTUD6AQ7L8S5 288 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 SLC13A5Q86YT5 568 aaPredicted RBP18.17■□□□□ 0.5
ACTB-207ENST00000462494 RNF25Q96BH1 459 aaPredicted RBP18.17■□□□□ 0.5
ACTB-207ENST00000462494 ATG4CQ96DT6 458 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 PNMA2Q9UL42 364 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 PCDHA3Q9Y5H8 950 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 TRAPPC3O43617 180 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 CPP00450 1065 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 CYP24A1Q07973 514 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 IFT88Q13099 833 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 SLC29A2Q14542 456 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 SPDYCQ5MJ68 293 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 PHLDB2Q86SQ0 1253 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 MDM1Q8TC05 714 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 RAPGEF5Q92565 580 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 FAM213AQ9BRX8 229 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 RNF146Q9NTX7 359 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 MTRF1LQ9UGC7 380 aaKnown RBP18.17■□□□□ 0.5
ACTB-207ENST00000462494 COQ4Q9Y3A0 265 aa18.17■□□□□ 0.5
ACTB-207ENST00000462494 VWA5AO00534 786 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 RARAP10276 462 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 KCNA3P22001 575 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 COILP38432 576 aaPredicted RBP18.16■□□□□ 0.5
ACTB-207ENST00000462494 RWDD2BP57060 319 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 ACAD10Q6JQN1 1059 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 SWSAP1Q6NVH7 229 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 MFSD14AQ96MC6 490 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 TEPSINQ96N21 525 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 SEMA4AQ9H3S1 761 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 UVRAGQ9P2Y5 699 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 TELO2Q9Y4R8 837 aa18.16■□□□□ 0.5
ACTB-207ENST00000462494 SRRM3A6NNA2 597 aaPredicted RBP18.15■□□□□ 0.5
ACTB-207ENST00000462494 ZNF862O60290 1169 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 FGFR4P22455 802 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 CCND2P30279 289 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 UBAP2Q5T6F2 1119 aaKnown RBP18.15■□□□□ 0.5
ACTB-207ENST00000462494 LMBRD2Q68DH5 695 aaPredicted RBP18.15■□□□□ 0.5
ACTB-207ENST00000462494 CIAPIN1Q6FI81 312 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 USP37Q86T82 979 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 TMC2Q8TDI7 906 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 DDX1Q92499 740 aaKnown RBP18.15■□□□□ 0.5
ACTB-207ENST00000462494 HVCN1Q96D96 273 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 PARP2Q9UGN5 583 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 CAPN7Q9Y6W3 813 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 ADGRA3Q8IWK6 1321 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 VGLL3A8MV65 326 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 CLDN3O15551 220 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 CTNND1O60716 968 aaKnown RBP18.15■□□□□ 0.5
ACTB-207ENST00000462494 NR3C2P08235 984 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 NUDT17P0C025 328 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 QPCTQ16769 361 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 CCDC25Q86WR0 208 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 GPD1LQ8N335 351 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 TLCD1Q96CP7 247 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 PAGR1Q9BTK6 254 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 SEPT9Q9UHD8 586 aaPredicted RBP18.15■□□□□ 0.5
ACTB-207ENST00000462494 ANAPC7Q9UJX3 599 aa18.15■□□□□ 0.5
ACTB-207ENST00000462494 ATXN2Q99700 1313 aaKnown RBP18.15■□□□□ 0.5
ACTB-207ENST00000462494 CDR1P51861 262 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 PPP1R7Q15435 360 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 FBXW10Q5XX13 1052 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 VSIG10LQ86VR7 867 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 SAMD3Q8N6K7 520 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 C1orf54Q8WWF1 131 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 KAT2BQ92831 832 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 SELENOSQ9BQE4 189 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 TAOK3Q9H2K8 898 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 AZI2Q9H6S1 392 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 H0YHG0 523 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms