RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 RPL17P18621 184 aaKnown RBP12.07□□□□□ -0.48
CBX3-205ENST00000462165 PSMA5P28066 241 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 GPC5P78333 572 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 PRKCQQ04759 706 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 MBTD1Q05BQ5 628 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 GRIK3Q13003 919 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 TFDP1Q14186 410 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 XKR9Q5GH70 373 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 PARM1Q6UWI2 310 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 MTSS1LQ765P7 747 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 GRASPQ7Z6J2 395 aaPredicted RBP12.07□□□□□ -0.48
CBX3-205ENST00000462165 NEK8Q86SG6 692 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 DYDC2Q96IM9 177 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 APOL6Q9BWW8 343 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 NFKBIZQ9BYH8 718 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 OSBPL6Q9BZF3 934 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 NXF3Q9H4D5 531 aaKnown RBP12.07□□□□□ -0.48
CBX3-205ENST00000462165 ZSWIM4Q9H7M6 989 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 XPNPEP1Q9NQW7 623 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 RGL1Q9NZL6 768 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 FBXO4Q9UKT5 387 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 CDH7Q9ULB5 785 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 TADA2AO75478 443 aa12.06□□□□□ -0.48
CBX3-205ENST00000462165 HNRNPA1P09651 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
CBX3-205ENST00000462165 AKAP5P24588 427 aa12.06□□□□□ -0.48
CBX3-205ENST00000462165 HOXA9P31269 272 aa12.06□□□□□ -0.48
CBX3-205ENST00000462165 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
CBX3-205ENST00000462165 SNW1Q13573 536 aaKnown RBP12.06□□□□□ -0.48
CBX3-205ENST00000462165 TOB2Q14106 344 aaPredicted RBP12.06□□□□□ -0.48
CBX3-205ENST00000462165 MLF2Q15773 248 aaPredicted RBP12.06□□□□□ -0.48
CBX3-205ENST00000462165 RSPO4Q2I0M5 234 aaPredicted RBP12.06□□□□□ -0.48
CBX3-205ENST00000462165 RTP2Q5QGT7 225 aa12.06□□□□□ -0.48
CBX3-205ENST00000462165 SLC27A1Q6PCB7 646 aa12.06□□□□□ -0.48
CBX3-205ENST00000462165 PRSS55Q6UWB4 352 aaPredicted RBP12.06□□□□□ -0.48
CBX3-205ENST00000462165 RSPO2Q6UXX9 243 aaPredicted RBP12.06□□□□□ -0.48
CBX3-205ENST00000462165 SKAP1Q86WV1 359 aa12.06□□□□□ -0.48
CBX3-205ENST00000462165 ST13P5Q8NFI4 369 aaPredicted RBP12.06□□□□□ -0.48
CBX3-205ENST00000462165 HAS1Q92839 578 aa12.06□□□□□ -0.48
CBX3-205ENST00000462165 BCO2Q9BYV7 579 aa12.06□□□□□ -0.48
CBX3-205ENST00000462165 SF3B1O75533 1304 aaKnown RBP eCLIP12.06□□□□□ -0.48
CBX3-205ENST00000462165 NCOR2Q9Y618 2525 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 CCDC194A0A1B0GVG4 234 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 CPLX1O14810 134 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 LAMTOR5O43504 91 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 CCNT1O60563 726 aaKnown RBP12.05□□□□□ -0.48
CBX3-205ENST00000462165 ARL2P36404 184 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 MAGEA9P43362 315 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 NTHL1P78549 312 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 TUSC3Q13454 348 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 CAPSQ13938 189 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 CTTNQ14247 550 aaKnown RBP12.05□□□□□ -0.48
CBX3-205ENST00000462165 HSP90AA2PQ14568 343 aaPredicted RBP12.05□□□□□ -0.48
CBX3-205ENST00000462165 SLC44A4Q53GD3 710 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 VARS2Q5ST30 1063 aaKnown RBP12.05□□□□□ -0.48
CBX3-205ENST00000462165 LIN9Q5TKA1 542 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 NCAPH2Q6IBW4 605 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 RUFY3Q7L099 469 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 LNX1Q8TBB1 728 aaPredicted RBP12.05□□□□□ -0.48
CBX3-205ENST00000462165 ASAP3Q8TDY4 903 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 PIK3R5Q8WYR1 880 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 RABGGTAQ92696 567 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 FGF13Q92913 245 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 ZNF274Q96GC6 653 aaPredicted RBP12.05□□□□□ -0.48
CBX3-205ENST00000462165 AIFM3Q96NN9 605 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 NAP1L4Q99733 375 aaKnown RBP12.05□□□□□ -0.48
CBX3-205ENST00000462165 CLSTN3Q9BQT9 956 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 PAAF1Q9BRP4 392 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 PHF20Q9BVI0 1012 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 LTB4R2Q9NPC1 389 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 SPATA6Q9NWH7 488 aaPredicted RBP12.05□□□□□ -0.48
CBX3-205ENST00000462165 KCNJ14Q9UNX9 436 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 PCDHGA2Q9Y5H1 932 aa12.05□□□□□ -0.48
CBX3-205ENST00000462165 KMT2BQ9UMN6 2715 aaPredicted RBP12.05□□□□□ -0.48
CBX3-205ENST00000462165 A0A1B0GUA9 196 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 SLITRK3O94933 977 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 LYPLA2O95372 231 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 NPTXRO95502 500 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 C8AP07357 584 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 POU2F2P09086 479 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 SDHBP21912 280 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 PFKPQ01813 784 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 CYP4A11Q02928 519 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 UBXN2BQ14CS0 331 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 PSMD5Q16401 504 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 PPM1LQ5SGD2 360 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 CPLX2Q6PUV4 134 aaKnown RBP12.04□□□□□ -0.48
CBX3-205ENST00000462165 CDR2LQ86X02 465 aaPredicted RBP12.04□□□□□ -0.48
CBX3-205ENST00000462165 SLFN12Q8IYM2 578 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 GPR161Q8N6U8 529 aaKnown RBP12.04□□□□□ -0.48
CBX3-205ENST00000462165 ZBTB44Q8NCP5 570 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 TTPALQ9BTX7 342 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 KLK14Q9P0G3 267 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 NCDNQ9UBB6 729 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 PARP2Q9UGN5 583 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 MTF2Q9Y483 593 aaPredicted RBP12.04□□□□□ -0.48
CBX3-205ENST00000462165 CACNA1BQ00975 2339 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 GPR179Q6PRD1 2367 aa12.04□□□□□ -0.48
CBX3-205ENST00000462165 TRIP11Q15643 1979 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 FAM170BA6NMN3 283 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 CCL16O15467 120 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms