RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 RUFY4Q6ZNE9 571 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 FAM186BQ8IYM0 893 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 XXYLT1Q8NBI6 393 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 TMEM174Q8WUU8 243 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 POMGNT1Q8WZA1 660 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 NAP1L5Q96NT1 182 aaPredicted RBP16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 ZBED2Q9BTP6 218 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 GCOM2Q9BZD3 368 aaPredicted RBP16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 OSBPL7Q9BZF2 842 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 RTN4Q9NQC3 1192 aaKnown RBP16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 HSPBP1Q9NZL4 362 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 A0A087WZ62 844 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 LGALS16A8MUM7 142 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 M0QZ92 97 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 CTSHP09668 335 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 GPC3P51654 580 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 UBXN1Q04323 297 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 NCBP1Q09161 790 aaKnown RBP16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 PRPF4BQ13523 1007 aaKnown RBP16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 NR1I3Q14994 352 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 VWA3BQ502W6 1294 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 TAS1R3Q7RTX0 852 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 SRGAP1Q7Z6B7 1085 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 IFNLR1Q8IU57 520 aaPredicted RBP16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 USP38Q8NB14 1042 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 FDXACB1Q9BRP7 624 aaPredicted RBP16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 TCHPQ9BT92 498 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 CCDC113Q9H0I3 377 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 IKZF4Q9H2S9 585 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 PCIF1Q9H4Z3 704 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 KIAA1586Q9HCI6 787 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 DMAC2Q9NW81 257 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 INSL6Q9Y581 213 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 SQORQ9Y6N5 450 aa16.54■□□□□ 0.24
TMEM39A-203ENST00000461654 ANKRD63C9JTQ0 380 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 ACKR2O00590 384 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 MAPK13O15264 365 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 AKAP3O75969 853 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 ERLIN2O94905 339 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 ARHGEF15O94989 841 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 LDHAP00338 332 aaKnown RBP16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 HTRA4P83105 476 aaPredicted RBP16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 FAM43BQ6ZT52 329 aaPredicted RBP16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 APTXQ7Z2E3 356 aaKnown RBP16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 TMCO2Q7Z6W1 182 aaPredicted RBP16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 USP37Q86T82 979 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 SPC24Q8NBT2 197 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 DNAJB3Q8WWF6 145 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 TOP1MTQ969P6 601 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 TRIM44Q96DX7 344 aaPredicted RBP16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 ZNF668Q96K58 619 aaPredicted RBP16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 PRIMPOLQ96LW4 560 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 PPP1R16BQ96T49 567 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 CBWD1Q9BRT8 395 aa16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 TARS2Q9BW92 718 aaKnown RBP16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 IFIH1Q9BYX4 1025 aaKnown RBP16.53■□□□□ 0.24
TMEM39A-203ENST00000461654 LCHNA4D1U4 455 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 CLDN3O15551 220 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 TOM1L1O75674 476 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 IGFBP4P22692 258 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 CASP4P49662 377 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 MBTD1Q05BQ5 628 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 PCBP1Q15365 356 aaKnown RBP eCLIP16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 FAM187BQ17R55 369 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 TCERG1LQ5VWI1 586 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 INTS8Q75QN2 995 aaKnown RBP16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 TMC6Q7Z403 805 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 VSTM4Q8IW00 320 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 TRIM59Q8IWR1 403 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 GPD1LQ8N335 351 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 SP7Q8TDD2 431 aaPredicted RBP16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 NDST4Q9H3R1 872 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 FZD8Q9H461 694 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 IFT122Q9HBG6 1241 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 ANKFY1Q9P2R3 1169 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 IMPACTQ9P2X3 320 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 GINS2Q9Y248 185 aa16.52■□□□□ 0.24
TMEM39A-203ENST00000461654 PTPRSQ13332 1948 aa16.52■□□□□ 0.23
TMEM39A-203ENST00000461654 CHD9Q3L8U1 2897 aa16.52■□□□□ 0.23
TMEM39A-203ENST00000461654 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 TISP43B9A030 160 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 TPM1P09493 284 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 ERVK-21P61565 698 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 MRPS6P82932 125 aaKnown RBP16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 TMEM62Q0P6H9 643 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 LPIN1Q14693 890 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 KIZQ2M2Z5 673 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 DCAF17Q5H9S7 520 aaPredicted RBP16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 FBXO47Q5MNV8 452 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 SPECC1LQ69YQ0 1117 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 APBB1IPQ7Z5R6 666 aaPredicted RBP16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 RDH13Q8NBN7 331 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 ARNTL2Q8WYA1 636 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 PCMTD1Q96MG8 357 aaPredicted RBP16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 MSTO1Q9BUK6 570 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 AGO2Q9UKV8 859 aaKnown RBP16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 CDY2AQ9Y6F7 541 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 STYXL1Q9Y6J8 313 aa16.51■□□□□ 0.23
TMEM39A-203ENST00000461654 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms