RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 LRRC15Q8TF66 581 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 MRPL17Q9NRX2 175 aaKnown RBP17.09■□□□□ 0.33
NUP50-213ENST00000461437 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 TEX28O15482 410 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 NPTX2P47972 431 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 GLUD2P49448 558 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 MCM2P49736 904 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 OSTNP61366 133 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 GIT2Q14161 759 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 ATF7IP2Q5U623 682 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 KIAA0319Q5VV43 1072 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 CES5AQ6NT32 575 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 ZBTB33Q86T24 672 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 FBXL18Q96ME1 805 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 COLEC11Q9BWP8 271 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 EMILIN2Q9BXX0 1053 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 SMOC2Q9H3U7 446 aa17.08■□□□□ 0.32
NUP50-213ENST00000461437 VPS37CA5D8V6 355 aaPredicted RBP17.07■□□□□ 0.32
NUP50-213ENST00000461437 CARNS1A5YM72 827 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 K7ERI5 159 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 SLC16A4O15374 487 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 KIF4AO95239 1232 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 NAB2Q15742 525 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
NUP50-213ENST00000461437 PALB2Q86YC2 1186 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 EDAQ92838 391 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 ADPGKQ9BRR6 497 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 TARS2Q9BW92 718 aaKnown RBP17.07■□□□□ 0.32
NUP50-213ENST00000461437 GOLGA2P5Q9HBQ8 144 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 MAN1C1Q9NR34 630 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 DZANK1Q9NVP4 752 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 ADAM28Q9UKQ2 775 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.07■□□□□ 0.32
NUP50-213ENST00000461437 DOCK8Q8NF50 2099 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 MYH15Q9Y2K3 1946 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 KMT2EQ8IZD2 1858 aa17.07■□□□□ 0.32
NUP50-213ENST00000461437 PHLPP2Q6ZVD8 1323 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 TADA2AO75478 443 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 HARSP12081 509 aaKnown RBP17.06■□□□□ 0.32
NUP50-213ENST00000461437 ZXDAP98168 799 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 ITIH3Q06033 890 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 TUSC3Q13454 348 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 DHX8Q14562 1220 aaKnown RBP17.06■□□□□ 0.32
NUP50-213ENST00000461437 HSP90AA2PQ14568 343 aaPredicted RBP17.06■□□□□ 0.32
NUP50-213ENST00000461437 RTP2Q5QGT7 225 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 KIAA1841Q6NSI8 718 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 FAM173BQ6P4H8 233 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 TMEM130Q8N3G9 435 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 RIN2Q8WYP3 895 aaPredicted RBP17.06■□□□□ 0.32
NUP50-213ENST00000461437 ZBTB45Q96K62 511 aaPredicted RBP17.06■□□□□ 0.32
NUP50-213ENST00000461437 CDT1Q9H211 546 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 KMT5AQ9NQR1 393 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 STK24Q9Y6E0 443 aa17.06■□□□□ 0.32
NUP50-213ENST00000461437 NR1I2O75469 434 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 RFPL2O75678 378 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 ASGR2P07307 311 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 PLA2G4BP0C869 781 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 EFNA5P52803 228 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 SLC12A3P55017 1021 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 DSG1Q02413 1049 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 DMP1Q13316 513 aaPredicted RBP17.05■□□□□ 0.32
NUP50-213ENST00000461437 CUL4AQ13619 759 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 ZNF568Q3ZCX4 644 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 TMEM119Q4V9L6 283 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 SEZ6Q53EL9 994 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 HYIQ5T013 277 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 PPFIBP1Q86W92 1011 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 CEP57Q86XR8 500 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 CDK5RAP3Q96JB5 506 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 ACO2Q99798 780 aaKnown RBP17.05■□□□□ 0.32
NUP50-213ENST00000461437 SFXN1Q9H9B4 322 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 CHST7Q9NS84 486 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 ARHGAP28Q9P2N2 729 aa17.05■□□□□ 0.32
NUP50-213ENST00000461437 ANK1P16157 1881 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 MUC6Q6W4X9 2439 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 TMEM221A6NGB7 291 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 M0R296 226 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 THP07101 528 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 MTHFRP42898 656 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 SF3A1Q15459 793 aaKnown RBP17.04■□□□□ 0.32
NUP50-213ENST00000461437 DCAF4L1Q3SXM0 396 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 ATAT1Q5SQI0 421 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 TRIM67Q6ZTA4 783 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 SYT2Q8N9I0 419 aaPredicted RBP17.04■□□□□ 0.32
NUP50-213ENST00000461437 RIPOR3Q96MK2 946 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 RXFP1Q9HBX9 757 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 TNFSF13BQ9Y275 285 aa17.04■□□□□ 0.32
NUP50-213ENST00000461437 ZMYM2Q9UBW7 1377 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 I3L4J1 428 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 MEFVO15553 781 aaPredicted RBP17.03■□□□□ 0.32
NUP50-213ENST00000461437 GLUD1P00367 558 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 ADH1AP07327 375 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 GUCY2CP25092 1073 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 SOX4Q06945 474 aaPredicted RBP17.03■□□□□ 0.32
NUP50-213ENST00000461437 KARSQ15046 597 aaKnown RBP17.03■□□□□ 0.32
NUP50-213ENST00000461437 PTPN21Q16825 1174 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 USP41Q3LFD5 358 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 ARSHQ5FYA8 562 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms