RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MRPS27Q92552 414 aaKnown RBP13.8□□□□□ -0.2
HDAC4-207ENST00000461113 RUBCNQ92622 972 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 TCF25Q9BQ70 676 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 RUSC1Q9BVN2 902 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 GDPD2Q9HCC8 539 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 GPRC5CQ9NQ84 441 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 ENTPD7Q9NQZ7 604 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 HCSTQ9UBK5 93 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 ODF2LQ9ULJ1 636 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 PADI3Q9ULW8 664 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 NOC2LQ9Y3T9 749 aaKnown RBP13.8□□□□□ -0.2
HDAC4-207ENST00000461113 TBKBP1A7MCY6 615 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 GLRA2P23416 452 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 ABCD1P33897 745 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 SYKP43405 635 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 PTENP60484 403 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 ITIH3Q06033 890 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 ASAP3Q8TDY4 903 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 RIN2Q8WYP3 895 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-207ENST00000461113 CASP10Q92851 521 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 GBP4Q96PP9 640 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 TNMDQ9H2S6 317 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 CDHR5Q9HBB8 845 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 ERVK-5Q9HDB9 667 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 CHST12Q9NRB3 414 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 C1orf112Q9NSG2 853 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 BLOC1S4Q9NUP1 217 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 DACT1Q9NYF0 836 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 TTC3P53804 2025 aa13.79□□□□□ -0.2
HDAC4-207ENST00000461113 A0A1B0GVL5 298 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 GOLGA6L22H0YM25 854 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 SKIP12755 728 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 PLS3P13797 630 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 SCP2P22307 547 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 MTHFRP42898 656 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 PEX3P56589 373 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 RAD51AP2Q09MP3 1159 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 CAPSQ13938 189 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 MAPK6Q16659 721 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 APBB1IPQ7Z5R6 666 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-207ENST00000461113 FAM228AQ86W67 206 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 SIX5Q8N196 739 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 MYCT1Q8N699 235 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 CHAMP1Q96JM3 812 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 NFKBIZQ9BYH8 718 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 PARVGQ9HBI0 331 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 KMT5AQ9NQR1 393 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 TYW1Q9NV66 732 aaKnown RBP13.78□□□□□ -0.2
HDAC4-207ENST00000461113 PRMT7Q9NVM4 692 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-207ENST00000461113 PUF60Q9UHX1 559 aaKnown RBP13.78□□□□□ -0.2
HDAC4-207ENST00000461113 FBXL21Q9UKT6 434 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 LZTS1Q9Y250 596 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 PCDHB7Q9Y5E2 793 aa13.78□□□□□ -0.2
HDAC4-207ENST00000461113 K7ERI5 159 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 STK25O00506 426 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 IDEP14735 1019 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 PFKFB1P16118 471 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 GAP43P17677 238 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 LIG1P18858 919 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 AXLP30530 894 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 SARSP49591 514 aaKnown RBP13.77□□□□□ -0.21
HDAC4-207ENST00000461113 STRN3Q13033 797 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 RARS2Q5T160 578 aaKnown RBP13.77□□□□□ -0.21
HDAC4-207ENST00000461113 TWF2Q6IBS0 349 aaKnown RBP13.77□□□□□ -0.21
HDAC4-207ENST00000461113 KANK3Q6NY19 840 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 DYMQ7RTS9 669 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 IFNLR1Q8IU57 520 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-207ENST00000461113 CCDC65Q8IXS2 484 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 C12orf76Q8N812 135 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-207ENST00000461113 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 DDX12PQ92771 950 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 CCDC47Q96A33 483 aaKnown RBP13.77□□□□□ -0.21
HDAC4-207ENST00000461113 ADAM2Q99965 735 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 CEP250Q9BV73 2442 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 TMX1Q9H3N1 280 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 IFT122Q9HBG6 1241 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 NGRNQ9NPE2 291 aaKnown RBP13.77□□□□□ -0.21
HDAC4-207ENST00000461113 HOOK1Q9UJC3 728 aaKnown RBP13.77□□□□□ -0.21
HDAC4-207ENST00000461113 PIN4Q9Y237 131 aaKnown RBP13.77□□□□□ -0.21
HDAC4-207ENST00000461113 HCFC2Q9Y5Z7 792 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 FRYLO94915 3013 aa13.77□□□□□ -0.21
HDAC4-207ENST00000461113 SFI1A8K8P3 1242 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 SLFN14P0C7P3 912 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 HACE1Q8IYU2 909 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 CNNM3Q8NE01 707 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 SPIRE2Q8WWL2 714 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 CCDC51Q96ER9 411 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 PRIMPOLQ96LW4 560 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 REEP2Q9BRK0 252 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 CWH43Q9H720 699 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 POLD4Q9HCU8 107 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 SEL1LQ9UBV2 794 aa13.76□□□□□ -0.21
HDAC4-207ENST00000461113 CFAP47Q6ZTR5 3102 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 CHD6Q8TD26 2715 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 A0A087X0B3 334 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 NPHP3-ACAD11A0A0J9YXS1 232 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms