RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 EFHBQ8N7U6 833 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 C2orf69Q8N8R5 385 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 TBC1D22AQ8WUA7 517 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 CHTF18Q8WVB6 975 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 LINC01599Q8WXQ3 324 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 CHMP4CQ96CF2 233 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 MTMR8Q96EF0 704 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 MAP6Q96JE9 813 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 VPS33BQ9H267 617 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 TDRD3Q9H7E2 651 aaKnown RBP5.76□□□□□ -1.49
SF3A3-202ENST00000460925 DDX4Q9NQI0 724 aaKnown RBP5.76□□□□□ -1.49
SF3A3-202ENST00000460925 CLDND1Q9NY35 253 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.76□□□□□ -1.49
SF3A3-202ENST00000460925 TRHDEQ9UKU6 1024 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 NUB1Q9Y5A7 615 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 TAF6LQ9Y6J9 622 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 OTOFQ9HC10 1997 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 RFX7Q2KHR2 1363 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 ATAD5Q96QE3 1844 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 GAKO14976 1311 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 CCDC171Q6TFL3 1326 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 CYP2D7A0A087X1C5 515 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 SGSM2O43147 1006 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 EPB41L2O43491 1005 aaKnown RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 DHX16O60231 1041 aaKnown RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 PEX14O75381 377 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 PRKD3O94806 890 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 CYP2D6P10635 497 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 KIR2DL1P43626 348 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 KIR2DL2P43627 348 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 KPNA1P52294 538 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 SESN3P58005 492 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 ERVK-21P61565 698 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 MAP2K1Q02750 393 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 SLC20A2Q08357 652 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 TCP10Q12799 353 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 PICALMQ13492 652 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 TNIP1Q15025 636 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 GPR19Q15760 415 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 RSPO4Q2I0M5 234 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 INAVAQ3KP66 663 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 APOBEC3HQ6NTF7 200 aaKnown RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 CDC42EP5Q6NZY7 148 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 GET4Q7L5D6 327 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 C11orf74Q86VG3 221 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 MAPKAPK5Q8IW41 473 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 SMAP1Q8IYB5 467 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 MSL3Q8N5Y2 521 aaKnown RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 AGBL3Q8NEM8 1001 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 COG1Q8WTW3 980 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 TEKT1Q969V4 418 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 TMEM169Q96HH4 297 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 PRMT6Q96LA8 375 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 RIOK1Q9BRS2 568 aaKnown RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 BOCQ9BWV1 1114 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.75□□□□□ -1.491e-7■■□□□ 13.8
SF3A3-202ENST00000460925 SMURF1Q9HCE7 757 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 MYOZ2Q9NPC6 264 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 NMRK2Q9NPI5 230 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 SPTLC3Q9NUV7 552 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 OXSMQ9NWU1 459 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 THG1LQ9NWX6 298 aaKnown RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 GGA3Q9NZ52 723 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 GPRC5DQ9NZD1 345 aa5.75□□□□□ -1.49
SF3A3-202ENST00000460925 SAP30BPQ9UHR5 308 aaKnown RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 FEZ2Q9UHY8 353 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 CNOT7Q9UIV1 285 aaKnown RBP5.75□□□□□ -1.49
SF3A3-202ENST00000460925 MYO3BQ8WXR4 1341 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.74□□□□□ -1.49
SF3A3-202ENST00000460925 GLTPD2A6NH11 291 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 TCP10L2B9ZVM9 353 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 WNT10BO00744 389 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 AKAP10O43572 662 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 PPP1R11O60927 126 aaPredicted RBP5.74□□□□□ -1.49
SF3A3-202ENST00000460925 FBXO21O94952 628 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 AMY2AP04746 511 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 ZBTB48P10074 688 aaPredicted RBP5.74□□□□□ -1.49
SF3A3-202ENST00000460925 AMY2BP19961 511 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 HAND2P61296 217 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 FKBP1AP62942 108 aaKnown RBP5.74□□□□□ -1.49
SF3A3-202ENST00000460925 SPIRE1Q08AE8 756 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 DUSP4Q13115 394 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 PPP2R5AQ15172 486 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 UBE3CQ15386 1083 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 DLGAP5Q15398 846 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 MSMPQ1L6U9 139 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 MCMDC2Q4G0Z9 681 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 GPR158Q5T848 1215 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 PRAMEF18Q5VWM3 479 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 IQSEC1Q6DN90 963 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 ZNF280DQ6N043 979 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 CEP68Q76N32 757 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 OTOP3Q7RTS5 596 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 PASD1Q8IV76 773 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 ZFPM1Q8IX07 1006 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 TEX11Q8IYF3 940 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 GPC2Q8N158 579 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 CBARPQ8N350 705 aaPredicted RBP5.74□□□□□ -1.49
SF3A3-202ENST00000460925 PLEKHO2Q8TD55 490 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 TGFBRAP1Q8WUH2 860 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms