RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 KRBA2Q6ZNG9 492 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 UNC13DQ70J99 1090 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 FMR1NBQ8N0W7 255 aaPredicted RBP22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 GLIS3Q8NEA6 775 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 ENGASEQ8NFI3 743 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 BICD1Q96G01 975 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 ZNF558Q96NG5 402 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 IPO9Q96P70 1041 aaKnown RBP22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 IKZF4Q9H2S9 585 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 ALG13Q9NP73 1137 aaKnown RBP22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 ANKFY1Q9P2R3 1169 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 GDAQ9Y2T3 454 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 TRIP11Q15643 1979 aa22.57■■□□□ 1.2
RPUSD3-210ENST00000460909 PVALEFA0A1B0GWK0 134 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 ANKRD63C9JTQ0 380 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 PTGESO14684 152 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 MEFVO15553 781 aaPredicted RBP22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 KLRC4O43908 158 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 ZC3H11AO75152 810 aaKnown RBP eCLIP22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 FGF18O76093 207 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 GCNT3O95395 438 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 GALTP07902 379 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 DNAJB1P25685 340 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 LIG4P49917 911 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 RNASELQ05823 741 aaKnown RBP22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 DSC1Q08554 894 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 SNW1Q13573 536 aaKnown RBP22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 NOLC1Q14978 699 aaKnown RBP eCLIP22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 CSPP1Q1MSJ5 1256 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 L1TD1Q5T7N2 865 aaKnown RBP22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 SLC39A11Q8N1S5 342 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 TMEM87AQ8NBN3 555 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 PCDHB13Q9Y5F0 798 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 STYXL1Q9Y6J8 313 aa22.56■■□□□ 1.2
RPUSD3-210ENST00000460909 GOLGA6L4A6NEF3 574 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 TISP43B9A030 160 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 GTPBP6O43824 516 aaPredicted RBP22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 FAM189A1O60320 539 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 ALCAMQ13740 583 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 ALKAL1Q6UXT8 129 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 EPM2AIP1Q7L775 607 aaPredicted RBP22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 COLGALT2Q8IYK4 626 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 THNSL1Q8IYQ7 743 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 MRPL38Q96DV4 380 aaKnown RBP22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 GBP3Q9H0R5 595 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 LMAN2LQ9H0V9 348 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 SPG21Q9NZD8 308 aa22.55■■□□□ 1.2
RPUSD3-210ENST00000460909 CITO14578 2027 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 A0A0B4J269 797 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 NT5C1B-RDH14C9J2C7 533 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 MYL1P05976 194 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 SLC11A1P49279 550 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 ALDH7A1P49419 539 aaKnown RBP22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 OSTNP61366 133 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 PLCB3Q01970 1234 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 GRIK3Q13003 919 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 NAB2Q15742 525 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 XKR4Q5GH76 650 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 FAM26FQ5R3K3 315 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 TMEM173Q86WV6 379 aaPredicted RBP22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 MAFAQ8NHW3 353 aaPredicted RBP22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 ACCSQ96QU6 501 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 TMEM175Q9BSA9 504 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 CCDC94Q9BW85 323 aaPredicted RBP22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 MYO7AQ13402 2215 aa22.54■■□□□ 1.2
RPUSD3-210ENST00000460909 GADD45BO75293 160 aaPredicted RBP22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 PRPF6O94906 941 aaKnown RBP22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 PRR29P0C7W0 189 aa22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 HARSP12081 509 aaKnown RBP22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 HOXD13P35453 343 aa22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 PPM1AP35813 382 aa22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 UBE3AQ05086 875 aa22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 SEZ6Q53EL9 994 aa22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 ACAP3Q96P50 834 aa22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 RPS6KC1Q96S38 1066 aa22.53■■□□□ 1.2
RPUSD3-210ENST00000460909 ADSSP30520 456 aa22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 FAM160A1Q05DH4 1040 aa22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 PTPROQ16827 1216 aa22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 SLC10A6Q3KNW5 377 aa22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 ZNF507Q8TCN5 953 aa22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 BCL7CQ8WUZ0 217 aaPredicted RBP22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 POF1BQ8WVV4 589 aa22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 IGSF21Q96ID5 467 aa22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 FAM193BQ96PV7 902 aaPredicted RBP22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 LZTS1Q9Y250 596 aa22.52■■□□□ 1.2
RPUSD3-210ENST00000460909 CARNS1A5YM72 827 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 NRP1O14786 923 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 OGTO15294 1046 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 EIF3DO15371 548 aaKnown RBP eCLIP22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 ALDH2P05091 517 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 TNFSF9P41273 254 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 MATR3P43243 847 aaKnown RBP eCLIP22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 DPYDQ12882 1025 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 ZBTB41Q5SVQ8 909 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 CLEC17AQ6ZS10 378 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 SNX27Q96L92 541 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 PPP1R10Q96QC0 940 aaKnown RBP22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 MSTO1Q9BUK6 570 aa22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 TOPORSQ9NS56 1045 aaPredicted RBP22.51■■□□□ 1.19
RPUSD3-210ENST00000460909 EXOC7Q9UPT5 735 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms