RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 CACNB2Q08289 660 aaPredicted RBP6.38□□□□□ -1.39
PTPN12-209ENST00000460731 ACVR2BQ13705 512 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 PTPAQ15257 358 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 INF2Q27J81 1249 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 WDR78Q5VTH9 848 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 MFSD14CQ5VZR4 134 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 PIK3AP1Q6ZUJ8 805 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 RNF214Q8ND24 703 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 TRPV1Q8NER1 839 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 CYP2W1Q8TAV3 490 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 ETNPPLQ8TBG4 499 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 HAS1Q92839 578 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 CDHR1Q96JP9 859 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 FAM20AQ96MK3 541 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 MPHOSPH6Q99547 160 aaKnown RBP6.38□□□□□ -1.39
PTPN12-209ENST00000460731 RIT2Q99578 217 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 EHMT1Q9H9B1 1298 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 KCNH7Q9NS40 1196 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 DDX41Q9UJV9 622 aaKnown RBP6.38□□□□□ -1.39
PTPN12-209ENST00000460731 PTCH2Q9Y6C5 1203 aa6.38□□□□□ -1.39
PTPN12-209ENST00000460731 BRCA2P51587 3418 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 NFASCO94856 1347 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 LAD1O00515 517 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 NKRFO15226 690 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPN12-209ENST00000460731 CTAGE5O15320 804 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 SEPT4O43236 478 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 FIBPO43427 364 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 PSMD10O75832 226 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 HSP90AA1P07900 732 aaKnown RBP6.37□□□□□ -1.39
PTPN12-209ENST00000460731 KCNA2P16389 499 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 CYP2C19P33261 490 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 PRPHP41219 470 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 NASPP49321 788 aaPredicted RBP6.37□□□□□ -1.39
PTPN12-209ENST00000460731 SETQ01105 290 aaPredicted RBP6.37□□□□□ -1.39
PTPN12-209ENST00000460731 SP2Q02086 613 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 SPIRE1Q08AE8 756 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 DUSP28Q4G0W2 176 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 ARL6IP4Q66PJ3 421 aaKnown RBP6.37□□□□□ -1.39
PTPN12-209ENST00000460731 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPN12-209ENST00000460731 RAET1EQ8TD07 263 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 SCFD2Q8WU76 684 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 SLC5A5Q92911 643 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 KIRREL1Q96J84 757 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 ZNF333Q96JL9 665 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 PGBD1Q96JS3 809 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 WDR11Q9BZH6 1224 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 UPF3AQ9H1J1 476 aaKnown RBP6.37□□□□□ -1.39
PTPN12-209ENST00000460731 NPHS2Q9NP85 383 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 CD320Q9NPF0 282 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 PDGFCQ9NRA1 345 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 RTEL1Q9NZ71 1219 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 CHMP5Q9NZZ3 219 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 GTF2IRD1Q9UHL9 959 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 RCOR1Q9UKL0 485 aa6.37□□□□□ -1.39
PTPN12-209ENST00000460731 LRRC37A2A6NM11 1700 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 IGKV6D-21A0A0A0MT36 114 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 MSH4O15457 936 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 ADCY6O43306 1168 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 SLC37A4O43826 429 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 MSCO60682 206 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 ATP9AO75110 1047 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 DUSP11O75319 330 aaKnown RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 ARIH2O95376 493 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 TDP2O95551 362 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 BMP15O95972 392 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 ARP10275 920 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 CST5P28325 142 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 NTF4P34130 210 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 CLCN7P51798 805 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 ATP2C1P98194 919 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 ITGB3BPQ13352 177 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 PDIA5Q14554 519 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 SLC39A14Q15043 492 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 CCDC144BQ3MJ40 725 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 GNPTABQ3T906 1256 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 TTC38Q5R3I4 469 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 PRAMEF19Q5SWL8 479 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 CELF3Q5SZQ8 465 aaKnown RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 CCSAPQ6IQ19 270 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 METTL7BQ6UX53 244 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 CYFIP1Q7L576 1253 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 NLRX1Q86UT6 975 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 PLA2G4DQ86XP0 818 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 LINC00301Q8NCQ3 95 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 FBXO15Q8NCQ5 510 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 GIMAP8Q8ND71 665 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 KLHDC9Q8NEP7 349 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 TMEM60Q9H2L4 133 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 AGO4Q9HCK5 861 aaKnown RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 TBC1D22BQ9NU19 505 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 CACNA2D2Q9NY47 1150 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 DDX25Q9UHL0 483 aaKnown RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 FAM184BQ9ULE4 1060 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 CNPY2Q9Y2B0 182 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 PCDHB6Q9Y5E3 794 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 DDX49Q9Y6V7 483 aaKnown RBP6.36□□□□□ -1.39
PTPN12-209ENST00000460731 TCHHQ07283 1943 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 DNAH12Q6ZR08 3092 aa6.36□□□□□ -1.39
PTPN12-209ENST00000460731 VPS37CA5D8V6 355 aaPredicted RBP6.35□□□□□ -1.39
PTPN12-209ENST00000460731 IPO5O00410 1097 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms