RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 FAM213AQ9BRX8 229 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 TRAIPQ9BWF2 469 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 MTIF3Q9H2K0 278 aaKnown RBP11.09□□□□□ -0.63
UPF2-204ENST00000460569 TSPY26PQ9H489 355 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 SNTG2Q9NY99 539 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 PARP2Q9UGN5 583 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 MEIS3P2A8K0S8 358 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 CETN3O15182 167 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 FAM189A1O60320 539 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 ZNF623O75123 536 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 CLTAP09496 248 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 CXCL8P10145 99 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 AKAP5P24588 427 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 CASP4P49662 377 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 ZNF165P49910 485 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 YARSP54577 528 aaKnown RBP11.08□□□□□ -0.64
UPF2-204ENST00000460569 ZNF445P59923 1031 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 FKBP3Q00688 224 aaKnown RBP11.08□□□□□ -0.64
UPF2-204ENST00000460569 MYL5Q02045 173 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 MYBPC2Q14324 1141 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 HSP90AA2PQ14568 343 aaPredicted RBP11.08□□□□□ -0.64
UPF2-204ENST00000460569 KYAT1Q16773 422 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 FOXR2Q6PJQ5 311 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 LRRC55Q6ZSA7 311 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 CBWD2Q8IUF1 395 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 NPAS4Q8IUM7 802 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 AOPEPQ8N6M6 819 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 RDH13Q8NBN7 331 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 HERVK_113Q902F9 699 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 ACAP3Q96P50 834 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 MED15Q96RN5 788 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 UBE2OQ9C0C9 1292 aaKnown RBP11.08□□□□□ -0.64
UPF2-204ENST00000460569 RNF39Q9H2S5 420 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 RPF1Q9H9Y2 349 aaKnown RBP11.08□□□□□ -0.64
UPF2-204ENST00000460569 KIAA1586Q9HCI6 787 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 DMAC2Q9NW81 257 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
UPF2-204ENST00000460569 TMEM161AQ9NX61 479 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 RBAKQ9NYW8 714 aaPredicted RBP11.08□□□□□ -0.64
UPF2-204ENST00000460569 CPSF3Q9UKF6 684 aaKnown RBP11.08□□□□□ -0.64
UPF2-204ENST00000460569 FRMD4BQ9Y2L6 1034 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 PCDHB7Q9Y5E2 793 aa11.08□□□□□ -0.64
UPF2-204ENST00000460569 FNDC1Q4ZHG4 1894 aaPredicted RBP11.08□□□□□ -0.64
UPF2-204ENST00000460569 GBF1Q92538 1859 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 ZNF233A6NK53 670 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 UPP2O95045 317 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 FGFR1OPO95684 399 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 EOMESO95936 686 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 ADRB2P07550 413 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 EPB41P11171 864 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 MLH1P40692 756 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 FAM189BP81408 668 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 PPP2R3AQ06190 1150 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 ENOX2Q16206 610 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 SNRNP35Q16560 246 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 CCDC40Q4G0X9 1142 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 C9orf50Q5SZB4 431 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 SPATA1Q5VX52 437 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 FAM117BQ6P1L5 589 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 CRELD2Q6UXH1 353 aaPredicted RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 AGMOQ6ZNB7 445 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 MRPL10Q7Z7H8 261 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 ZNF598Q86UK7 904 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 ZC3H3Q8IXZ2 948 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 FAM186BQ8IYM0 893 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 ENOX1Q8TC92 643 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 RNPC3Q96LT9 517 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 FBXL18Q96ME1 805 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 CEP63Q96MT8 703 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 RPS6KC1Q96S38 1066 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 GDF15Q99988 308 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 BPIFA3Q9BQP9 254 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 ANP32EQ9BTT0 268 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 SRRTQ9BXP5 876 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 ELAC1Q9H777 363 aaKnown RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 RSAD1Q9HA92 442 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 TOPORSQ9NS56 1045 aaPredicted RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 CXXC1Q9P0U4 656 aaPredicted RBP11.07□□□□□ -0.64
UPF2-204ENST00000460569 SLC4A7Q9Y6M7 1214 aa11.07□□□□□ -0.64
UPF2-204ENST00000460569 COL4A6Q14031 1691 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 BECN2A8MW95 431 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 SLC16A3O15427 465 aaKnown RBP11.06□□□□□ -0.64
UPF2-204ENST00000460569 HOXA2O43364 376 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 AKAP3O75969 853 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 CAVIN2O95810 425 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 FGFR1P11362 822 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 PSMC2P35998 433 aaKnown RBP11.06□□□□□ -0.64
UPF2-204ENST00000460569 CYP24A1Q07973 514 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 SHHQ15465 462 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 GLB1LQ6UWU2 654 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 TMCO2Q7Z6W1 182 aaPredicted RBP11.06□□□□□ -0.64
UPF2-204ENST00000460569 BRSK2Q8IWQ3 736 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 FAM200AQ8TCP9 573 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 HELQQ8TDG4 1101 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 TMEM174Q8WUU8 243 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 SNX27Q96L92 541 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 SLC9A7Q96T83 725 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms