RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 C19orf54Q5BKX5 351 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 ZMAT1Q5H9K5 638 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 FNDC7Q5VTL7 733 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 USP45Q70EL2 814 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 CATIPQ7Z7H3 387 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 DNAJC10Q8IXB1 793 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 MIER2Q8N344 545 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 LILRA3Q8N6C8 439 aaPredicted RBP4.45□□□□□ -1.7
RFC4-211ENST00000460408 GPR156Q8NFN8 814 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 SNX33Q8WV41 574 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 RIN2Q8WYP3 895 aaPredicted RBP4.45□□□□□ -1.7
RFC4-211ENST00000460408 CFHR4Q92496 578 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 LPPQ93052 612 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 HPS3Q969F9 1004 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 RUNDC1Q96C34 613 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 PLEKHG4BQ96PX9 1271 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 TAAR9Q96RI9 348 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 MSL2Q9HCI7 577 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 GEMIN8Q9NWZ8 242 aaKnown RBP4.45□□□□□ -1.7
RFC4-211ENST00000460408 RPTORQ8N122 1335 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 CCDC154A6NI56 674 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 MATN2O00339 956 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 GSPT1P15170 499 aaKnown RBP4.44□□□□□ -1.7
RFC4-211ENST00000460408 ATF3P18847 181 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 PDCP20941 246 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 ADCY7P51828 1080 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 RRADP55042 308 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 TUBA3CQ13748 450 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 ZNF267Q14586 743 aaPredicted RBP4.44□□□□□ -1.7
RFC4-211ENST00000460408 UAP1L1Q3KQV9 507 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 MINDY4Q4G0A6 757 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 TUBA3EQ6PEY2 450 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 Q6ZVL8 140 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 USP30Q70CQ3 517 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 NOL8Q76FK4 1167 aaKnown RBP4.44□□□□□ -1.7
RFC4-211ENST00000460408 PLA2G15Q8NCC3 412 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.44□□□□□ -1.7
RFC4-211ENST00000460408 SLC35G2Q8TBE7 412 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 LARP4BQ92615 738 aaKnown RBP4.44□□□□□ -1.7
RFC4-211ENST00000460408 SLC7A6OSQ96CW6 309 aaPredicted RBP4.44□□□□□ -1.7
RFC4-211ENST00000460408 CLIP3Q96DZ5 547 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 OR14A2Q96R54 314 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 UIMC1Q96RL1 719 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 DPYSL5Q9BPU6 564 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 ADI1Q9BV57 179 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 ZNF703Q9H7S9 590 aaPredicted RBP4.44□□□□□ -1.7
RFC4-211ENST00000460408 C14orf93Q9H972 538 aaKnown RBP4.44□□□□□ -1.7
RFC4-211ENST00000460408 NMRK2Q9NPI5 230 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 INTUQ9ULD6 942 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 DNM3Q9UQ16 869 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 SIK3Q9Y2K2 1263 aa4.44□□□□□ -1.7
RFC4-211ENST00000460408 GOLGA6CA6NDK9 693 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 GOLGA6BA6NDN3 693 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 FAM171A2A8MVW0 826 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 KIF3BO15066 747 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 CDC14BO60729 498 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 PRAMEF4O60810 478 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 PHF2O75151 1096 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 PPFIA2O75334 1257 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 ALDH1A2O94788 518 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 TOX4O94842 621 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 ADH4P08319 380 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 GOLGA6DP0CG33 693 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 GNALP38405 381 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 RPS19P39019 145 aaKnown RBP4.43□□□□□ -1.7
RFC4-211ENST00000460408 KIR2DL3P43628 341 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 SLC6A9P48067 706 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 WNT3AP56704 352 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 GFOD2Q3B7J2 385 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 GJC2Q5T442 439 aaPredicted RBP4.43□□□□□ -1.7
RFC4-211ENST00000460408 IFIT1BQ5T764 474 aaKnown RBP4.43□□□□□ -1.7
RFC4-211ENST00000460408 PCSK4Q6UW60 755 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 ZNF808Q8N4W9 903 aaPredicted RBP4.43□□□□□ -1.7
RFC4-211ENST00000460408 ZNF483Q8TF39 744 aaPredicted RBP4.43□□□□□ -1.7
RFC4-211ENST00000460408 DIS3LQ8TF46 1054 aaKnown RBP4.43□□□□□ -1.7
RFC4-211ENST00000460408 DPF2Q92785 391 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 LRGUKQ96M69 825 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 PLA2G12BQ9BX93 195 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 MMRN2Q9H8L6 949 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 AURKAIP1Q9NWT8 199 aaPredicted RBP4.43□□□□□ -1.7
RFC4-211ENST00000460408 ING3Q9NXR8 418 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 OBP2AQ9NY56 170 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 GOLGA6AQ9NYA3 693 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 TRPS1Q9UHF7 1281 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 FAM184BQ9ULE4 1060 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 RBM8AQ9Y5S9 174 aaKnown RBP4.43□□□□□ -1.7
RFC4-211ENST00000460408 TNFRSF18Q9Y5U5 241 aa4.43□□□□□ -1.7
RFC4-211ENST00000460408 VSTM5A8MXK1 200 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 ERC2O15083 957 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 ARHGAP6O43182 974 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 DAPK3O43293 454 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 AP1G1O43747 822 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 AKR1B10O60218 316 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 OFD1O75665 1012 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 VSIG10L2P0DP72 767 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 HSPA6P17066 643 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 MAKP20794 623 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 DSC2Q02487 901 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 HNRNPA0Q13151 305 aaKnown RBP4.42□□□□□ -1.7
RFC4-211ENST00000460408 IL10RAQ13651 578 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms