RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 SPATA31A6Q5VVP1 1343 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 PRLRP16471 622 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 GJB7Q6PEY0 223 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 JAMLQ86YT9 394 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 ABI1Q8IZP0 508 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 BEST2Q8NFU1 509 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 TMEM143Q96AN5 459 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 NOP53Q9NZM5 478 aaKnown RBP15.67■□□□□ 0.1
PTPRU-205ENST00000460170 SLC12A6Q9UHW9 1150 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 COMTP21964 271 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 DDX42Q86XP3 938 aaKnown RBP eCLIP15.67■□□□□ 0.1
PTPRU-205ENST00000460170 PPM1NQ8N819 430 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 RUSC1Q9BVN2 902 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 IL17RBQ9NRM6 502 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 EHD2Q9NZN4 543 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 ITIH2P19823 946 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 KIF22Q14807 665 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 TRMT10CQ7L0Y3 403 aaKnown RBP15.67■□□□□ 0.1
PTPRU-205ENST00000460170 LRRC37BQ96QE4 947 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 BCL9O00512 1426 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 TNS2Q63HR2 1409 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 MEFVO15553 781 aaPredicted RBP15.67■□□□□ 0.1
PTPRU-205ENST00000460170 HSPA9P38646 679 aaKnown RBP15.67■□□□□ 0.1
PTPRU-205ENST00000460170 STX1BP61266 288 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 HERVK_113P62684 666 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 NFX1Q12986 1120 aaKnown RBP15.67■□□□□ 0.1
PTPRU-205ENST00000460170 RASIP1Q5U651 963 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 C3orf67Q6ZVT6 689 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 TMEM8AQ9HCN3 771 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 PPARGC1AQ9UBK2 798 aaKnown RBP15.67■□□□□ 0.1
PTPRU-205ENST00000460170 L1RE1Q9UN81 338 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 PCDHB2Q9Y5E7 798 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 USH1CQ9Y6N9 552 aa15.67■□□□□ 0.1
PTPRU-205ENST00000460170 HUS1O60921 280 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 NCF2P19878 526 aaPredicted RBP15.66■□□□□ 0.1
PTPRU-205ENST00000460170 MKRN3Q13064 507 aaKnown RBP15.66■□□□□ 0.1
PTPRU-205ENST00000460170 OR2W6PQ8NHA6 318 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 ATP8B3O60423 1300 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 PON1P27169 355 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 IRAK1P51617 712 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 RAB44Q7Z6P3 723 aaPredicted RBP15.66■□□□□ 0.1
PTPRU-205ENST00000460170 DCLK2Q8N568 766 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 TPCN2Q8NHX9 752 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 AGBL1Q96MI9 1066 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 NUDCD1Q96RS6 583 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 ERP44Q9BS26 406 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 KLHL8Q9P2G9 620 aaPredicted RBP15.66■□□□□ 0.1
PTPRU-205ENST00000460170 RSPH10B2B2RC85 870 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 PI4K2BG5E9Z4 385 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 PRKCBP05771 671 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 RSPH10BP0C881 870 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 SKIP12755 728 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 ROR1Q01973 937 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 RNF139Q8WU17 664 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 CARD9Q9H257 536 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 FGFR1OP2Q9NVK5 253 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 KRT3P12035 628 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 TBX2Q13207 712 aaPredicted RBP15.66■□□□□ 0.1
PTPRU-205ENST00000460170 WDR72Q3MJ13 1102 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 TRIM65Q6PJ69 517 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 RCOR2Q8IZ40 523 aa15.66■□□□□ 0.1
PTPRU-205ENST00000460170 ZNF473Q8WTR7 871 aaKnown RBP15.66■□□□□ 0.1
PTPRU-205ENST00000460170 A0A087X0B3 334 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 SREBF1P36956 1147 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 PMS1P54277 932 aaKnown RBP15.65■□□□□ 0.1
PTPRU-205ENST00000460170 CDH6P55285 790 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 NCOA4Q13772 614 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 AGBL2Q5U5Z8 902 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 CELF4Q9BZC1 486 aaKnown RBP15.65■□□□□ 0.1
PTPRU-205ENST00000460170 VCX3AQ9NNX9 186 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 ANKEF1Q9NU02 776 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 GYG2O15488 501 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 MAFGO15525 162 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 ZBTB7AO95365 584 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 NPEPPSP55786 919 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 ICE2Q659A1 982 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 GRAMD1AQ96CP6 724 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 MOV10L1Q9BXT6 1211 aaKnown RBP15.65■□□□□ 0.1
PTPRU-205ENST00000460170 TMEM117Q9H0C3 514 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 SENP1Q9P0U3 644 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 ARHGAP20Q9P2F6 1191 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 ZFP69BQ9UJL9 534 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 GOLGA8CPA6NN73 597 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 GYS1P13807 737 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 RBBP5Q15291 538 aaKnown RBP15.65■□□□□ 0.1
PTPRU-205ENST00000460170 JADE1Q6IE81 842 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 STYK1Q6J9G0 422 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 RBBP8NLQ8NC74 664 aaPredicted RBP15.65■□□□□ 0.1
PTPRU-205ENST00000460170 ZNF280CQ8ND82 737 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 C18orf8Q96DM3 657 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 OTUD5Q96G74 571 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 LRGUKQ96M69 825 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 SENP7Q9BQF6 1050 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 TMEM39BQ9GZU3 492 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 EPS15L1Q9UBC2 864 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 FAM237AA0A1B0GTK4 181 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 CDH16O75309 829 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 LSP1P33241 339 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 SEPT6Q14141 434 aa15.65■□□□□ 0.1
PTPRU-205ENST00000460170 GIT2Q14161 759 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 1214.1 ms