RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 RXRBP28702 533 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 MORF4L2Q15014 288 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 C1orf228Q6PIY5 440 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 PARVAQ9NVD7 372 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 SNX5Q9Y5X3 404 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 ARHGEF37A1IGU5 675 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 K7ERI5 159 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 SPAG6O75602 509 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 PCYT1AP49585 367 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 CENPCQ03188 943 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 TBX2Q13207 712 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 CYLC2Q14093 348 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 KRT33BQ14525 404 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 TBCCQ15814 346 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 CC2D2BQ6DHV5 1058 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 TRIM67Q6ZTA4 783 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 TBC1D22BQ9NU19 505 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 PAIP2BQ9ULR5 123 aaKnown RBP12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 EMSYQ7Z589 1322 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 ROR1Q01973 937 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 CDKL3Q8IVW4 592 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 KIF2BQ8N4N8 673 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 TUFT1Q9NNX1 390 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 ABCF3Q9NUQ8 709 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 IL1RAPL1Q9NZN1 696 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 SUN2Q9UH99 717 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 SASH3O75995 380 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 CNGA3Q16281 694 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 FBXL13Q8NEE6 735 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 ACTRT1Q8TDG2 376 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 MTBPQ96DY7 904 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 ING2Q9H160 280 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 NPHS2Q9NP85 383 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 DLGAP2Q9P1A6 1054 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 SLC4A7Q9Y6M7 1214 aa12.08□□□□□ -0.48
TRAPPC10-204ENST00000459741 MYMKA6NI61 221 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 SRRM3A6NNA2 597 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 KLHL2O95198 593 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 ANP32DO95626 131 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 NPEPPSP55786 919 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 SKOR1P84550 965 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 SLC29A2Q14542 456 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 KYNUQ16719 465 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 TMEM270Q6UE05 265 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 DDX42Q86XP3 938 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 SCG3Q8WXD2 468 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 NSL1Q96IY1 281 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 MKNK1Q9BUB5 465 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 MRGBPQ9NV56 204 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 UBE4BO95155 1302 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 FSBPO95073 299 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 GRAPQ13588 217 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 ZNF667Q5HYK9 610 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 TEKT4Q8WW24 435 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 KRT82Q9NSB4 513 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 RNF103-CHMP3A0A140T963 221 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 PAMP19021 973 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 HOXA13P31271 388 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 FMO5P49326 533 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 HERVK_113P62684 666 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 HLFQ16534 295 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 PACS2Q86VP3 889 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 FBXL16Q8N461 479 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 DTX3LQ8TDB6 740 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 PIGBQ92521 554 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 VPS11Q9H270 941 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 OLA1Q9NTK5 396 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 ZFATQ9P243 1243 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 WARS2Q9UGM6 360 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 TRIM49P0CI25 452 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 TRIM49CP0CI26 452 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 PODNQ7Z5L7 613 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 ZBTB33Q86T24 672 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 CEP95Q96GE4 821 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 TIPINQ9BVW5 301 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 FNDC3AQ9Y2H6 1198 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 FIS1Q9Y3D6 152 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 IQGAP1P46940 1657 aa12.07□□□□□ -0.48
TRAPPC10-204ENST00000459741 CCDC195A0A1B0GUA6 201 aa12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 TBX3O15119 743 aa12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 P4HBP07237 508 aaKnown RBP12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 SCP2P22307 547 aa12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 GNA15P30679 374 aa12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 RCSD1Q6JBY9 416 aa12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 TPCN2Q8NHX9 752 aa12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 RNF217Q8TC41 542 aa12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 HEXIM2Q96MH2 286 aaKnown RBP12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 AGXT2Q9BYV1 514 aa12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 MAN1A2O60476 641 aa12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 ENO1P06733 434 aaKnown RBP12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 RFX5P48382 616 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 EFTUD2Q15029 972 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 TBC1D10BQ4KMP7 808 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC10-204ENST00000459741 CYP4F11Q9HBI6 524 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms