RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PPP1R13BQ96KQ4 1090 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 POP1Q99575 1024 aaKnown RBP26.47■■□□□ 1.83
U2AF1-204ENST00000459639 TRMT1Q9NXH9 659 aaKnown RBP26.47■■□□□ 1.83
U2AF1-204ENST00000459639 APEX2Q9UBZ4 518 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 GTF2IRD1Q9UHL9 959 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 ERLIN2O94905 339 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 ASGR1P07306 291 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 ZNF200P98182 395 aaPredicted RBP26.47■■□□□ 1.83
U2AF1-204ENST00000459639 NBPF20Q3BBV1 942 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 TAF2Q6P1X5 1199 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 CCDC170Q8IYT3 715 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 NME8Q8N427 588 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 DNAJB3Q8WWF6 145 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 SPAG5Q96R06 1193 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 CDT1Q9H211 546 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 TOPORSQ9NS56 1045 aaPredicted RBP26.47■■□□□ 1.83
U2AF1-204ENST00000459639 AIPL1Q9NZN9 384 aa26.47■■□□□ 1.83
U2AF1-204ENST00000459639 CPSF3Q9UKF6 684 aaKnown RBP26.47■■□□□ 1.83
U2AF1-204ENST00000459639 TSPAN1O60635 241 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 INHAP05111 366 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 CCDC175P0C221 793 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 MCF2P10911 925 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 JAM2P57087 298 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 MAP2K1Q02750 393 aaPredicted RBP26.46■■□□□ 1.83
U2AF1-204ENST00000459639 RAPGEF1Q13905 1077 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 KCNA10Q16322 511 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 IQCEQ6IPM2 695 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 C15orf39Q6ZRI6 1047 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 CGRRF1Q99675 332 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 PDZD7Q9H5P4 517 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 PDE11AQ9HCR9 933 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 ADGRG1Q9Y653 693 aa26.46■■□□□ 1.83
U2AF1-204ENST00000459639 CSDE1O75534 798 aaKnown RBP26.45■■□□□ 1.82
U2AF1-204ENST00000459639 ARF4P18085 180 aaPredicted RBP26.45■■□□□ 1.82
U2AF1-204ENST00000459639 CYLC1P35663 651 aaPredicted RBP26.45■■□□□ 1.82
U2AF1-204ENST00000459639 TMEM62Q0P6H9 643 aa26.45■■□□□ 1.82
U2AF1-204ENST00000459639 SV2AQ7L0J3 742 aa26.45■■□□□ 1.82
U2AF1-204ENST00000459639 SESTD1Q86VW0 696 aa26.45■■□□□ 1.82
U2AF1-204ENST00000459639 DESI2Q9BSY9 194 aa26.45■■□□□ 1.82
U2AF1-204ENST00000459639 NHEJ1Q9H9Q4 299 aaPredicted RBP26.45■■□□□ 1.82
U2AF1-204ENST00000459639 EPN1Q9Y6I3 576 aaPredicted RBP26.45■■□□□ 1.82
U2AF1-204ENST00000459639 NDUFA10O95299 355 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 TNFSF9P41273 254 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 WNT7BP56706 349 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 SURF1Q15526 300 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 RNF180Q86T96 592 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 FBXL13Q8NEE6 735 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 ARHGAP20Q9P2F6 1191 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 AJAP1Q9UKB5 411 aaPredicted RBP26.44■■□□□ 1.82
U2AF1-204ENST00000459639 GOLGA6L9A6NEM1 432 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 DARSP14868 501 aaKnown RBP26.44■■□□□ 1.82
U2AF1-204ENST00000459639 TNNI1P19237 187 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 GRK4P32298 578 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 SEZ6Q53EL9 994 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 GJB7Q6PEY0 223 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 VTI1AQ96AJ9 217 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 BEGAINQ9BUH8 593 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 DNAJC12Q9UKB3 198 aa26.44■■□□□ 1.82
U2AF1-204ENST00000459639 SERPING1P05155 500 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 AP3M2P53677 418 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 POU5F1Q01860 360 aaKnown RBP26.43■■□□□ 1.82
U2AF1-204ENST00000459639 ASIC2Q16515 512 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 KYAT1Q16773 422 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 ZACNQ401N2 412 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 SLC9C1Q4G0N8 1177 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 HGSNATQ68CP4 663 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 FMNL3Q8IVF7 1028 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 REXO1L1PQ8IX06 675 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 ZNF516Q92618 1163 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 CPB2Q96IY4 423 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 OSMRQ99650 979 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 STK33Q9BYT3 514 aa26.43■■□□□ 1.82
U2AF1-204ENST00000459639 HMX1Q9NP08 348 aaPredicted RBP26.43■■□□□ 1.82
U2AF1-204ENST00000459639 A0A1B0GUA9 196 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 SSU72P8A0A1W2PR75 194 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 TULP1O00294 542 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-204ENST00000459639 CABYRO75952 493 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 MAPK8IP2Q13387 824 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-204ENST00000459639 PHLDB3Q6NSJ2 640 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 CDR2LQ86X02 465 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-204ENST00000459639 WDR49Q8IV35 697 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 THNSL1Q8IYQ7 743 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 CCDC42Q96M95 316 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 RAB20Q9NX57 234 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 GINS2Q9Y248 185 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 TRIM17Q9Y577 477 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 PTCH2Q9Y6C5 1203 aa26.42■■□□□ 1.82
U2AF1-204ENST00000459639 C4BPAP04003 597 aaKnown RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 RPLP2P05387 115 aaKnown RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 EIF4BP23588 611 aaKnown RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 NCBP1Q09161 790 aaKnown RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 GDF6Q6KF10 455 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 NYAP1Q6ZVC0 841 aa26.41■■□□□ 1.82
U2AF1-204ENST00000459639 TAS1R2Q8TE23 839 aa26.41■■□□□ 1.82
U2AF1-204ENST00000459639 SEMA4DQ92854 862 aa26.41■■□□□ 1.82
U2AF1-204ENST00000459639 ADPGKQ9BRR6 497 aa26.41■■□□□ 1.82
U2AF1-204ENST00000459639 CDHR5Q9HBB8 845 aa26.41■■□□□ 1.82
U2AF1-204ENST00000459639 PTPRJQ12913 1337 aa26.41■■□□□ 1.82
U2AF1-204ENST00000459639 EIF3CLB5ME19 914 aaKnown RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 F8VZ95 297 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms