RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 POTEMA6NI47 508 aa23.81■■□□□ 1.4
CPNE1-220ENST00000458038 F8W810 466 aa23.81■■□□□ 1.4
CPNE1-220ENST00000458038 NEFLP07196 543 aa23.81■■□□□ 1.4
CPNE1-220ENST00000458038 NPR3P17342 541 aa23.81■■□□□ 1.4
CPNE1-220ENST00000458038 CATSPER3Q86XQ3 398 aa23.81■■□□□ 1.4
CPNE1-220ENST00000458038 SIX5Q8N196 739 aa23.81■■□□□ 1.4
CPNE1-220ENST00000458038 ERMNQ8TAM6 284 aa23.81■■□□□ 1.4
CPNE1-220ENST00000458038 LARGE1O95461 756 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 SPATA31D3P0C874 917 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 MUTP22033 750 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 RPA1P27694 616 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 NEK4P51957 841 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 ELAVL2Q12926 359 aaKnown RBP23.8■■□□□ 1.4
CPNE1-220ENST00000458038 MAPK6Q16659 721 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 PDXDC1Q6P996 788 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 SPATA31D4Q6ZUB0 917 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 CDR2LQ86X02 465 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-220ENST00000458038 CCDC105Q8IYK2 499 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 SLC44A3Q8N4M1 653 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 ADPGKQ9BRR6 497 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 KLK14Q9P0G3 267 aa23.8■■□□□ 1.4
CPNE1-220ENST00000458038 PRR23AA6NEV1 266 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 THP07101 528 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 SRFP11831 508 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 MCM7P33993 719 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 PPP2R5AQ15172 486 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 B3GALT6Q96L58 329 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 MYADMQ96S97 322 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 TTPALQ9BTX7 342 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 TMEM60Q9H2L4 133 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 GPRC5CQ9NQ84 441 aa23.79■■□□□ 1.4
CPNE1-220ENST00000458038 A0A087WWV3 80 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 WNT7AO00755 349 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 JAK2O60674 1132 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 ZMYND10O75800 440 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 HNRNPA1P09651 372 aaKnown RBP eCLIP23.78■■□□□ 1.4
CPNE1-220ENST00000458038 LAMP2P13473 410 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 CYP11B2P19099 503 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 PRPF4BQ13523 1007 aaKnown RBP23.78■■□□□ 1.4
CPNE1-220ENST00000458038 TMEM132AQ24JP5 1023 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 MAEAQ7L5Y9 396 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 DTWD2Q8NBA8 298 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 PIK3R5Q8WYR1 880 aa23.78■■□□□ 1.4
CPNE1-220ENST00000458038 NKD2Q969F2 451 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-220ENST00000458038 GVINP1Q7Z2Y8 2422 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 ARHGEF35A5YM69 484 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 STK25O00506 426 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 ACKR2O00590 384 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 PI15O43692 258 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 MED24O75448 989 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 NAMPTP43490 491 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 EFNA5P52803 228 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 PADI6Q6TGC4 694 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 ASCL5Q7RTU5 278 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 PDZD7Q9H5P4 517 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 DOCK6Q96HP0 2047 aa23.77■■□□□ 1.4
CPNE1-220ENST00000458038 NARSO43776 548 aaKnown RBP23.76■■□□□ 1.39
CPNE1-220ENST00000458038 CFHP08603 1231 aa23.76■■□□□ 1.39
CPNE1-220ENST00000458038 RFX1P22670 979 aa23.76■■□□□ 1.39
CPNE1-220ENST00000458038 HOXA9P31269 272 aa23.76■■□□□ 1.39
CPNE1-220ENST00000458038 APBB1IPQ7Z5R6 666 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-220ENST00000458038 GLYCTKQ8IVS8 523 aa23.76■■□□□ 1.39
CPNE1-220ENST00000458038 DEPTORQ8TB45 409 aa23.76■■□□□ 1.39
CPNE1-220ENST00000458038 RSAD2Q8WXG1 361 aa23.76■■□□□ 1.39
CPNE1-220ENST00000458038 FOXP1Q9H334 677 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-220ENST00000458038 SNTG2Q9NY99 539 aa23.76■■□□□ 1.39
CPNE1-220ENST00000458038 FBXW11Q9UKB1 542 aa23.76■■□□□ 1.39
CPNE1-220ENST00000458038 ANHXE9PGG2 379 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 PRKCBP05771 671 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 OR52Z1P0C646 297 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 MYBP10242 640 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 RPL17P18621 184 aaKnown RBP23.75■■□□□ 1.39
CPNE1-220ENST00000458038 ANGPT1Q15389 498 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 PSMD5Q16401 504 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 DCAF4L1Q3SXM0 396 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 RTP2Q5QGT7 225 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 LIN9Q5TKA1 542 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 FAM171A1Q5VUB5 890 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 HAUS3Q68CZ6 603 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 PHLDB3Q6NSJ2 640 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 RTL10Q7L3V2 364 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 FRMD5Q7Z6J6 570 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 IFT74Q96LB3 600 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 LLPHQ9BRT6 129 aaKnown RBP23.75■■□□□ 1.39
CPNE1-220ENST00000458038 SEMA4AQ9H3S1 761 aa23.75■■□□□ 1.39
CPNE1-220ENST00000458038 KRBA1A5PL33 1030 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 CASTOR2A6NHX0 329 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 PTGESO14684 152 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 RECQL4O94761 1208 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 FSHRP23945 695 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 RBM25P49756 843 aaKnown RBP23.74■■□□□ 1.39
CPNE1-220ENST00000458038 FOSBP53539 338 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 UVSSAQ2YD98 709 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 POTEGQ6S5H5 508 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 PRSS55Q6UWB4 352 aaPredicted RBP23.74■■□□□ 1.39
CPNE1-220ENST00000458038 GET4Q7L5D6 327 aaPredicted RBP23.74■■□□□ 1.39
CPNE1-220ENST00000458038 LNX1Q8TBB1 728 aaPredicted RBP23.74■■□□□ 1.39
CPNE1-220ENST00000458038 RABGGTAQ92696 567 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 KIFAP3Q92845 792 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 C8orf76Q96K31 380 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms