RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 MAPK13O15264 365 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 SPOPO43791 374 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 EYA4O95677 639 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 GPC5P78333 572 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 IL9RQ01113 521 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 SPIRE1Q08AE8 756 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 BMT2Q1RMZ1 405 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 TSNAXIP1Q2TAA8 658 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 TAF1BQ53T94 588 aaPredicted RBP11.02□□□□□ -0.65
CLIP4-208ENST00000456385 MTHFD1LQ6UB35 978 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 KIAA0825Q8IV33 1275 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 ZNF333Q96JL9 665 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 C9orf72Q96LT7 481 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 GPR101Q96P66 508 aaPredicted RBP11.02□□□□□ -0.65
CLIP4-208ENST00000456385 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 PPP1R12CQ9BZL4 782 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 WHRNQ9P202 907 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 USH1CQ9Y6N9 552 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 SPATA31A1Q5TZJ5 1347 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 FAM47DPA6NHR8 397 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 SIGLEC16A6NMB1 481 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 USP17L10C9JJH3 530 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 ABLIM1O14639 778 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 NVLO15381 856 aaKnown RBP11.01□□□□□ -0.65
CLIP4-208ENST00000456385 ATP5HO75947 161 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 ASMTLO95671 621 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 GGPS1O95749 300 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 BTDP43251 543 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 CYP2J2P51589 502 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 HADHBP55084 474 aaKnown RBP11.01□□□□□ -0.65
CLIP4-208ENST00000456385 KIF22Q14807 665 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 TMED2Q15363 201 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 SGO2Q562F6 1265 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 PRR16Q569H4 304 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 DSTYKQ6XUX3 929 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 PPP1R21Q6ZMI0 780 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 RPUSD2Q8IZ73 545 aaKnown RBP11.01□□□□□ -0.65
CLIP4-208ENST00000456385 NRG4Q8WWG1 115 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 INPP5DQ92835 1189 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 PCDHB18PQ96TA0 734 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 EPAS1Q99814 870 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 LRRC19Q9H756 370 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 USP20Q9Y2K6 914 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 STARD13Q9Y3M8 1113 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 FAM196BA6NMK8 535 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 CDH16O75309 829 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 RNF8O76064 485 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 PPP4CP60510 307 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 LAMB3Q13751 1172 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 RCN2Q14257 317 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 CMPK2Q5EBM0 449 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 NSMFQ6X4W1 530 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 KCTD1Q719H9 257 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 KIFAP3Q92845 792 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 IFT43Q96FT9 208 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 MIPEPQ99797 713 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 FAM118BQ9BPY3 351 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 HERPUD2Q9BSE4 406 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 RTFDC1Q9BY42 306 aaPredicted RBP11.01□□□□□ -0.65
CLIP4-208ENST00000456385 WNT8AQ9H1J5 351 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 UBE2TQ9NPD8 197 aaPredicted RBP11.01□□□□□ -0.65
CLIP4-208ENST00000456385 PCMTD2Q9NV79 361 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 MTMR4Q9NYA4 1195 aa11.01□□□□□ -0.65
CLIP4-208ENST00000456385 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
CLIP4-208ENST00000456385 A0A1W2PRG0 241 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 ZBTB39O15060 712 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 TBCAO75347 108 aaKnown RBP11□□□□□ -0.65
CLIP4-208ENST00000456385 PYGLP06737 847 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 FGFR1P11362 822 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 ITIH2P19823 946 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 TBC1D25Q3MII6 688 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 ASPRV1Q53RT3 343 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 DDX60LQ5H9U9 1706 aaKnown RBP11□□□□□ -0.65
CLIP4-208ENST00000456385 WASHC2DQ5SRD0 308 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 SNX30Q5VWJ9 437 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 CYP4F22Q6NT55 531 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 SLC30A10Q6XR72 485 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 CCNJLQ8IV13 435 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 LRRC8CQ8TDW0 803 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 SPIRE2Q8WWL2 714 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 SNF8Q96H20 258 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 TRIM4Q9C037 500 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 DCLRE1BQ9H816 532 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 RGL1Q9NZL6 768 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 LGALS13Q9UHV8 139 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 ATP9AO75110 1047 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 RPA1P27694 616 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 ADCY8P40145 1251 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 NOVP48745 357 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 DLG4P78352 724 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 MYL7Q01449 175 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 RCN1Q15293 331 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 MTDHQ86UE4 582 aaKnown RBP11□□□□□ -0.65
CLIP4-208ENST00000456385 ARHGEF19Q8IW93 802 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 C4orf33Q8N1A6 199 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 C12orf50Q8NA57 414 aaPredicted RBP11□□□□□ -0.65
CLIP4-208ENST00000456385 ZFAND2BQ8WV99 257 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 C10orf82Q8WW14 230 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 SCG3Q8WXD2 468 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 563.9 ms