RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.64■□□□□ 0.73
MSH6-207ENST00000456246 ADAM28Q9UKQ2 775 aa19.64■□□□□ 0.73
MSH6-207ENST00000456246 SF3B1O75533 1304 aaKnown RBP eCLIP19.63■□□□□ 0.73
MSH6-207ENST00000456246 H0YCG3 227 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 EDN1P05305 212 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 CNPP09543 421 aaKnown RBP19.63■□□□□ 0.73
MSH6-207ENST00000456246 PLA2G4BP0C869 781 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 PLS3P13797 630 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 SCP2P22307 547 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 CLCN4P51793 760 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 DSG1Q02413 1049 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 SF3A1Q15459 793 aaKnown RBP19.63■□□□□ 0.73
MSH6-207ENST00000456246 NT5DC1Q5TFE4 455 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 FUT10Q6P4F1 479 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 LRFN3Q9BTN0 628 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 CCDC94Q9BW85 323 aaPredicted RBP19.63■□□□□ 0.73
MSH6-207ENST00000456246 SFXN1Q9H9B4 322 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 RXFP1Q9HBX9 757 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 POLD4Q9HCU8 107 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 TOPORSQ9NS56 1045 aaPredicted RBP19.63■□□□□ 0.73
MSH6-207ENST00000456246 LARSQ9P2J5 1176 aaKnown RBP19.63■□□□□ 0.73
MSH6-207ENST00000456246 NR2E1Q9Y466 385 aa19.63■□□□□ 0.73
MSH6-207ENST00000456246 PRR33A8MZF0 331 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 K7ELQ4 463 aaPredicted RBP19.62■□□□□ 0.73
MSH6-207ENST00000456246 PTGESO14684 152 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 TADA2AO75478 443 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 EPCAMP16422 314 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 STRN3Q13033 797 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 HSP90AA2PQ14568 343 aaPredicted RBP19.62■□□□□ 0.73
MSH6-207ENST00000456246 USP41Q3LFD5 358 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 ZNF568Q3ZCX4 644 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 RASSF8Q8NHQ8 419 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 RPGRIP1Q96KN7 1286 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 FBXL18Q96ME1 805 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 ACO2Q99798 780 aaKnown RBP19.62■□□□□ 0.73
MSH6-207ENST00000456246 CHST7Q9NS84 486 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 ODF2LQ9ULJ1 636 aa19.62■□□□□ 0.73
MSH6-207ENST00000456246 MYH11P35749 1972 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 SPDYE4A6NLX3 237 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 C2CD2LO14523 706 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 MCF2P10911 925 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 SYT1P21579 422 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 GRM5P41594 1212 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 YARSP54577 528 aaKnown RBP19.61■□□□□ 0.73
MSH6-207ENST00000456246 ELAVL2Q12926 359 aaKnown RBP19.61■□□□□ 0.73
MSH6-207ENST00000456246 ATAT1Q5SQI0 421 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 KIAA0319Q5VV43 1072 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 KCNN1Q92952 543 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 PLIN2Q99541 437 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 APOL5Q9BWW9 433 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 CDT1Q9H211 546 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 C11orf16Q9NQ32 467 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 MUTYHQ9UIF7 546 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 USP20Q9Y2K6 914 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 GDAQ9Y2T3 454 aa19.61■□□□□ 0.73
MSH6-207ENST00000456246 SLC16A4O15374 487 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 BRD1O95696 1058 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 GLUD1P00367 558 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 RARS2Q5T160 578 aaKnown RBP19.6■□□□□ 0.73
MSH6-207ENST00000456246 PDXDC1Q6P996 788 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 MPZL3Q6UWV2 235 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 ZPBP2Q6X784 338 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 C15orf39Q6ZRI6 1047 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 UROC1Q96N76 676 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 PTPRHQ9HD43 1115 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 FNIP2Q9P278 1114 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 HCN4Q9Y3Q4 1203 aa19.6■□□□□ 0.73
MSH6-207ENST00000456246 CASTOR2A6NHX0 329 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 TEX28O15482 410 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 PROZP22891 400 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 ABCD1P33897 745 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 CYP26C1Q6V0L0 522 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 TAS1R3Q7RTX0 852 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 TAS1R1Q7RTX1 841 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 TMEM161BQ8NDZ6 487 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 CMASQ8NFW8 434 aaPredicted RBP19.59■□□□□ 0.73
MSH6-207ENST00000456246 HDAC7Q8WUI4 952 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 TCHPQ9BT92 498 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 TARS2Q9BW92 718 aaKnown RBP19.59■□□□□ 0.73
MSH6-207ENST00000456246 RHOBTB2Q9BYZ6 727 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 GPR62Q9BZJ7 368 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 CCSER1Q9C0I3 900 aa19.59■□□□□ 0.73
MSH6-207ENST00000456246 ZSCAN16Q9H4T2 348 aaPredicted RBP19.59■□□□□ 0.73
MSH6-207ENST00000456246 MORC2Q9Y6X9 1032 aaPredicted RBP19.59■□□□□ 0.73
MSH6-207ENST00000456246 FAM86C2PA6NEL3 165 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 SFI1A8K8P3 1242 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 F8W810 466 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 TMEM189-UBE2V1I3L0A0 370 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 TOM1L1O75674 476 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 MAPTP10636 758 aaKnown RBP19.58■□□□□ 0.72
MSH6-207ENST00000456246 PLCG1P19174 1290 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 RAD51AP2Q09MP3 1159 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 RESTQ13127 1097 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 NAB2Q15742 525 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 GPR149Q86SP6 731 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 GPBP1Q86WP2 473 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 RAD54LQ92698 747 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 EDAQ92838 391 aa19.58■□□□□ 0.72
MSH6-207ENST00000456246 PPP1R10Q96QC0 940 aaKnown RBP19.58■□□□□ 0.72
MSH6-207ENST00000456246 PLEKHA4Q9H4M7 779 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms